Tc01v2_t006160.1

Overview
NameTc01v2_t006160.1
Unique NameTc01v2_t006160.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length1356
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 10 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
Productformamidase
NoteAcetamidase/Formamidase family protein isoform 1
Cross References
External references for this mRNA
DatabaseAccession
GeneID18611267
GenbankXM_018124461.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc01v2_g006160Tc01v2_g006160Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc01v2_p006160.1Tc01v2_p006160.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto13608auto13608Theobroma cacaoexon
exon-auto13609auto13609Theobroma cacaoexon
exon-auto13610auto13610Theobroma cacaoexon
exon-auto13611auto13611Theobroma cacaoexon
exon-auto13612auto13612Theobroma cacaoexon
exon-auto13613auto13613Theobroma cacaoexon
exon-auto13614auto13614Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto13615auto13615Theobroma cacaoCDS
CDS-auto13616auto13616Theobroma cacaoCDS
CDS-auto13617auto13617Theobroma cacaoCDS
CDS-auto13618auto13618Theobroma cacaoCDS
CDS-auto13619auto13619Theobroma cacaoCDS
CDS-auto13620auto13620Theobroma cacaoCDS
CDS-auto13621auto13621Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc01v2_t006160.1 ID=Tc01v2_t006160.1|Name=Tc01v2_t006160.1|organism=Theobroma cacao|type=mRNA|length=1356bp
ATGGCTCCAACTCCAAGACTGGTGGTGCCAATAGACTTGAAGAAGAAGCC
ATGGGAACAAACTCTGCCTCTTCACAACCGTTGGCACCCTGAAATACCCT
CGGTAGCGGATGTTGAAGTCGGTGAGGTCTTTAGAGTAGAGATGGTAGAC
TGGACTGGAGGTATCATAAAAGATGATGATTCCGCAACTGATGTAAAATT
TATAGATCTCTCCACTGTCCATTATCTCAGTGGGCCAATTAGAGTTGTAG
ACAAGGATGGCATACCTGCCAAGCCAGGTGATCTTCTTGCAGTTGAAATA
TGTAACCTGGGTCCTTTGCCGGGGGACGAATGGGGTTATACAGCAACGTT
TGACAGAGAAAATGGAGGAGGTTTCTTGACAGACCATTTTCCATGCGCAA
CTAAAGCTATTTGGTATTTTGAAGGAATTTATGCCTACTCTCCCCATATA
CCAGGGGTGAGATTTCCGGGTTTGACTCATCCTGGAATAATTGGGACTGC
ACCATCAATGGAACTTCTGAATATATGGAATGAAAGGGAAAGAGAAGTAG
AAGAAAATGGCCATAAGTCCCTAAAACTATGTGAAGTTTTGCATTCAAGA
CCGTTGGCAAACCTTCCATCAACCAAAGGCTGCCATTTAGGAAAGATAAC
TAAGGGGACTGCTGAATGGGAAAAGATTGCTAAGGAAGCGGCAAGGACTA
TTCCTGGAAGAGAAAATGGAGGAAATTGTGACATCAAGAACCTTAGTAGA
GGTTCGAAAATATATCTTCCAGTGTTCGTAGAAGGAGCAAATTTCAGCAC
CGGTGACATGCATTTTTCTCAAGGTGATGGTGAAGTTGCCTTCTGCGGAG
CAATTGAGATGAGTGGTTTTCTAGAGCTAAAGTGCGAAATCATAAGAGGT
GGAATGAAAGAGTACCTTACTCCAATGGGGCCAACCCCACTTCATGTAAA
CCCAATCTTCGAGATTGGCCCAGTTGAACCCAGATTCTCAGAATGGCTGG
TGTTTGAGGGGATAAGCGTGGATGAGACCGGAAGGCAACATTTCCTTGAT
GCAAGTGTTGCATATAAACGTGCAGTACTCAATGCTATTGACTACCTCTC
TAAGTTTGGGTACTCCAAAGAACAGATATACCTTCTGCTATCCTGCTGCC
CATGTGAAGGAAGGATATCTGGAATTGTGGATTCACCAAATGCTCTTGCA
ACTCTTGCAATTCCAACTGCTATCTTTGACCAGGACATTCGTCCAAAAAC
TGGAAAGGTACCAGTAGGGCCTCGGCTAGTGAGAAAACCAGATGTCTTAA
GATGCACTTACGATGGAAATCTTCCCACAACAAAGAACCCAGCTGCCTTG
ATGTAA
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protein sequence of Tc01v2_p006160.1

>Tc01v2_p006160.1 ID=Tc01v2_p006160.1|Name=Tc01v2_p006160.1|organism=Theobroma cacao|type=polypeptide|length=452bp
MAPTPRLVVPIDLKKKPWEQTLPLHNRWHPEIPSVADVEVGEVFRVEMVD
WTGGIIKDDDSATDVKFIDLSTVHYLSGPIRVVDKDGIPAKPGDLLAVEI
CNLGPLPGDEWGYTATFDRENGGGFLTDHFPCATKAIWYFEGIYAYSPHI
PGVRFPGLTHPGIIGTAPSMELLNIWNEREREVEENGHKSLKLCEVLHSR
PLANLPSTKGCHLGKITKGTAEWEKIAKEAARTIPGRENGGNCDIKNLSR
GSKIYLPVFVEGANFSTGDMHFSQGDGEVAFCGAIEMSGFLELKCEIIRG
GMKEYLTPMGPTPLHVNPIFEIGPVEPRFSEWLVFEGISVDETGRQHFLD
ASVAYKRAVLNAIDYLSKFGYSKEQIYLLLSCCPCEGRISGIVDSPNALA
TLAIPTAIFDQDIRPKTGKVPVGPRLVRKPDVLRCTYDGNLPTTKNPAAL
M*
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