|
Properties
Property Name | Value |
Model evidence | Supporting evidence includes similarity to: 4 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns |
Product | F-box-like/WD repeat-containing protein TBL1XR1, transcript variant X3 |
Note | Putative COMPASS-like H3K4 histone methylase component WDR5A |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Tc01v2_t005760.3 ID=Tc01v2_t005760.3|Name=Tc01v2_t005760.3|organism=Theobroma cacao|type=mRNA|length=1617bp ATGGAAGCCAACTTGAGTAATAATGATGTAGAAATGGATGAAGATTTCTC ATTCTTACAACCTTTGGATATAATAACAAAGGATGTAAATCAATTGCGGC AAATGATAAAAGAGAAAAGGAAGAGTGTCCAAAAGGATAGAGAGAAAGAG AAAGATAAAGATAAAGAGTTTGACCGGGAACATGAAGGAGAGCGTGGACG AGTAAGAGAGAAAGAAAGACATGAGAGGGAGAAGGAACGTGAAAAGGAAA GGGAGAAGGATCGTGAAAAGGAAAGGGAGAAGGAACATGAAAAGGAAAGG GAGAAGGAACATGCAAAGGAAAGGGAGAAGGAATGCGAAAAGGAAAGGGA GAAGGTTGAAAGGGATAAGGAGCGAGAAAAGCAACCGGAGGAACTTGCTG ATAGGGATATGGTTATGGATCAAGAAGACAAGGATGTTGTCAAGAATGAA GAAAATGGAACGTCTGTAGTAGGACCAGAACCTATGGATATTGCTACTAC CTCAGCCCCTGCTTCTCAAGAGGCTTGTGAAATTCCTAATTCTGATGTGA CAATTTTGGAAGGGCATACTTCTGAGGTTTGTGCTTGTGCATGGAGTCCA ACTGGTTCACTTCTTGCATCAGGGTCTGGAGATTCAACAGCTCGTATTTG GACAATAGCTGATGGGCTTTGCAAATCTGGTACACAAAACAGTCCATTAA ATGTTCTGGTGCTGAAGCATGTAAAAGGAAGAACAAATGAGAAGAGCAAA GACGTGACAACACTCGACTGGAATGGTGAGGGGACATCGCTTGCAACAGG TTCATATGATGGCCAAGCAAGAATTTGGACTACGAATGGTGAACTAAGGA CTACTTTGAGTAAACACAAAGGACCAATATTTTCCCTGAAGTGGAACAAA AAGGGTGATTATCTTCTTACAGGAAGCTGTGATAAAACGGCAATTGTGTG GGATGTAAAGGCAGAGGAATGGAAACAGCAGTTTGAGTTTCACACGGGTC CAACCCTTGATGTTGATTGGCGCAACAATGTTTCATTTGCAACAAGCTCC ACAGACCATATGATATATGTTTGCAAGATTGGAGAAACCCGCCCTATTAA AACCTTTGCAGGGCATCAGGGTGAAGTAAATTGTGTCAAATGGGATCCTA CAGGTTCACTATTGGCCTCTTGCTCTGATGATATTACTGCAAAGATATGG TGTATGAAGCAGGATAAGTATGTACATGATCTGAGGGAGCATTCTAAGGA GATATATGCCATCAGATGGAGTCCTACGGGGCCTGGGACAAACAATCCTA ACCAGCAGTTAATTCTTGCAAGTGCATCATTTGACTCCACAGTGAAGCTG TGGGATGTGGAGTTAGGGAAACTTCTCTACAGTTTGAATGGACACAGGGA TCCTGTATATTCGGTTGCATTTAGCCCAAATGGAGAGTATCTGGCCAGTG GGTCTCTTGATAAATCCATGCATGTCTGGTCCTTAAAGGAAGGAAAGATT GTAAAGACATATACTGGCAATGGGGGTATATTTGAAGTCTGTTGGAACAA GGAAGGTGACAAGATTGCTGCTTGTTTTGCAAACAATACACTATGTGTCC TGGACTTTAGAATGTGA back to topprotein sequence of Tc01v2_p005760.3 >Tc01v2_p005760.3 ID=Tc01v2_p005760.3|Name=Tc01v2_p005760.3|organism=Theobroma cacao|type=polypeptide|length=539bp
MEANLSNNDVEMDEDFSFLQPLDIITKDVNQLRQMIKEKRKSVQKDREKE KDKDKEFDREHEGERGRVREKERHEREKEREKEREKDREKEREKEHEKER EKEHAKEREKECEKEREKVERDKEREKQPEELADRDMVMDQEDKDVVKNE ENGTSVVGPEPMDIATTSAPASQEACEIPNSDVTILEGHTSEVCACAWSP TGSLLASGSGDSTARIWTIADGLCKSGTQNSPLNVLVLKHVKGRTNEKSK DVTTLDWNGEGTSLATGSYDGQARIWTTNGELRTTLSKHKGPIFSLKWNK KGDYLLTGSCDKTAIVWDVKAEEWKQQFEFHTGPTLDVDWRNNVSFATSS TDHMIYVCKIGETRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDITAKIW CMKQDKYVHDLREHSKEIYAIRWSPTGPGTNNPNQQLILASASFDSTVKL WDVELGKLLYSLNGHRDPVYSVAFSPNGEYLASGSLDKSMHVWSLKEGKI VKTYTGNGGIFEVCWNKEGDKIAACFANNTLCVLDFRM* back to top
|