Tc01v2_t002680.1

Overview
NameTc01v2_t002680.1
Unique NameTc01v2_t002680.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length1302
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 27 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
Productmannan endo-1,4-beta-mannosidase 7
NoteMannan endo-1,4-beta-mannosidase 7
Cross References
External references for this mRNA
DatabaseAccession
GeneID18610892
GenbankXM_007046809.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc01v2_g002680Tc01v2_g002680Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc01v2_p002680.1Tc01v2_p002680.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto6312auto6312Theobroma cacaoexon
exon-auto6313auto6313Theobroma cacaoexon
exon-auto6314auto6314Theobroma cacaoexon
exon-auto6315auto6315Theobroma cacaoexon
exon-auto6316auto6316Theobroma cacaoexon
exon-auto6317auto6317Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto6318auto6318Theobroma cacaoCDS
CDS-auto6319auto6319Theobroma cacaoCDS
CDS-auto6320auto6320Theobroma cacaoCDS
CDS-auto6321auto6321Theobroma cacaoCDS
CDS-auto6322auto6322Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc01v2_t002680.1 ID=Tc01v2_t002680.1|Name=Tc01v2_t002680.1|organism=Theobroma cacao|type=mRNA|length=1302bp
ATGAAGCATCTGGTTCTGGCTCTTTTTCTTGCTGTTTTGTTCAACCAGCA
CCTTCTTTCTGTCCAAGTTGAAGCAAGGGATGATTTTATCAGGACCAGAG
GGGTCCATTTCCTGTTGAATGGTAACCCTTACTATGCAAATGGTTTCAAT
GCTTACTGGTTGATGTATGTGGCTTCTGATCCATCTCAGAGGCCTAAAGT
CTCAGCTGCATTTCGTGAAGCTGCGGCTCATGGCCTCACAGTGGCTAGAA
CTTGGGCTTTCAGTGATGGTGGTTATAGACCCTTACAGTATGCGCCAGGT
TCCTACAATGAACAAATGTTTAAGGGGTTGGATTTTGTAATAGCTGAGGC
TAGAAGGTATCGAATCAAGCTTATCCTGAGCTTAGCTAATAACTATGAGA
GCTTTGGAGGAAAGAAACAATATGTAAACTGGGCAAGAAGCCAGGGGCAG
TACCTGACATCTGATGATGATTTCTTCAGAAATCCTGTTGTTAAGGGCTA
CTACAAGAATCATGTAAAGACTGTTCTCAACAGATACAACAGCTTTACTG
GAATGCATTACAAAGATGACCCAACAATAATGGCCTGGGAGCTTATGAAT
GAGCCTAGATGCACATCAGATTCCTCCGGAAGGACTATTCAGGCTTGGAT
AATGGAAATGGCTTCTCATGTCAAGTCCATAGACAGAAATCACTTGCTGG
AAGCTGGTTTAGAAGGATTTTATGGACAATCAACTGCTCAGAAGATGAGA
CTAAACCCCAACTTGAATATTGGAACAGATTTCATTGCAAATAATCAGAT
TCCTGGCATTGATTTTGCAACAGTCCACTCATATCCTGACCAATGGTTAT
CCAGCTCAAATGATCAGTACCAACTCTCTTTCTTGAACAAGTGGCTCGAT
GCTCACATCCAAGACGCACAATTCATCCTCCGAAAGCCGGTACTCCTCAC
AGAATTCGGAAAATCATGGAAAGATCCTGGTTTCAGCACCTATAAGAGGG
ATCAACTGTTCAACACTGTCTACTACAAGATATACTCGTCAGCCAAAAGA
GGAGGTCCAGCTGCTGGTGGCCTGTTTTGGCAACTCCTATCCGAAGGCAT
GGACTCTTTCAGGGATGGATATGACATAGTCTTGAGTGAGAGCCCCTCAA
CAGCTAATGCCATTTCCCAACAATCCCACAAGCTCGACCAAATCCGTAGG
ATCTTTACCAGGATGAGAAATGTGGAGCGGTGGAAGAGGGCAAGAGCCAT
GAGGAGGGGTCAGTGGCATGGTGGAAACGGGGGCAGGCACATTGGAAACT
GA
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protein sequence of Tc01v2_p002680.1

>Tc01v2_p002680.1 ID=Tc01v2_p002680.1|Name=Tc01v2_p002680.1|organism=Theobroma cacao|type=polypeptide|length=434bp
MKHLVLALFLAVLFNQHLLSVQVEARDDFIRTRGVHFLLNGNPYYANGFN
AYWLMYVASDPSQRPKVSAAFREAAAHGLTVARTWAFSDGGYRPLQYAPG
SYNEQMFKGLDFVIAEARRYRIKLILSLANNYESFGGKKQYVNWARSQGQ
YLTSDDDFFRNPVVKGYYKNHVKTVLNRYNSFTGMHYKDDPTIMAWELMN
EPRCTSDSSGRTIQAWIMEMASHVKSIDRNHLLEAGLEGFYGQSTAQKMR
LNPNLNIGTDFIANNQIPGIDFATVHSYPDQWLSSSNDQYQLSFLNKWLD
AHIQDAQFILRKPVLLTEFGKSWKDPGFSTYKRDQLFNTVYYKIYSSAKR
GGPAAGGLFWQLLSEGMDSFRDGYDIVLSESPSTANAISQQSHKLDQIRR
IFTRMRNVERWKRARAMRRGQWHGGNGGRHIGN*
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