TcUnv2_t000140.1

Overview
NameTcUnv2_t000140.1
Unique NameTcUnv2_t000140.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length1440
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
ProductMATH domain and coiled-coil domain-containing protein At3g58270
NoteUbiquitin-specific protease 12 isoform 1
Cross References
External references for this mRNA
DatabaseAccession
GeneID18586885
GenbankXM_007010464.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
TcUnv2_g000140TcUnv2_g000140Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
TcUnv2_p000140.1TcUnv2_p000140.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto515483auto515483Theobroma cacaoexon
exon-auto515484auto515484Theobroma cacaoexon
exon-auto515485auto515485Theobroma cacaoexon
exon-auto515486auto515486Theobroma cacaoexon
exon-auto515487auto515487Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto515488auto515488Theobroma cacaoCDS
CDS-auto515489auto515489Theobroma cacaoCDS
CDS-auto515490auto515490Theobroma cacaoCDS
CDS-auto515491auto515491Theobroma cacaoCDS
CDS-auto515492auto515492Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>TcUnv2_t000140.1 ID=TcUnv2_t000140.1|Name=TcUnv2_t000140.1|organism=Theobroma cacao|type=mRNA|length=1440bp
ATGCATAAAGAAAGGATGTCCATGAACGAACAGAGGAGGGTCAAAGACTG
GATAGAGCACGGTCTAGAACTAGAAGTGGATAGTAGTGAGTCTCAGTCTG
TGGAGAGTCAACAAGTGAGGAAGTGCACATGGAGGATTGAGAATTTCTCC
TGTATTAAATGCAAGAAGCTCTACTCTAACACTTTCCATGTTGGTGGCAA
CAAATGGCGACTTCTTGTCTTCCCCAAGGGGAACCCCCAGTGGAACCGAG
TGGATCATATTTCATTTTATGTAGATGTTGCGGATGCAGCAACTTTGCCT
TATGGATGGAGTAGATATGCCCAACTCAGACTAACTGTCGTCAACCAAAT
TGATCGTAAATATTCGATTACAAAAGTTACTGACCATGAGTTTAATGCAA
AGGAGAATGATTGGGGCTTCACTTCATTCATGCCTCTCGATGAATTACTC
GACCCTAAGAGAGGCTATCTCGTGAATGATGCATGCTTAGTTGAAGCTTA
CATTGCCACCGATAGGACTATTGATTTGCTGTCAGATGCATTGATAGTTG
AACTTGAAACTGCTTCTGATAAACTCAAGAGCAAGGAAGCTGATCATGGT
AAAGCAGCCATAGACAACCAAAAAACTGCAATAGCCGAACCAGAGGAAAT
CACCACTCGGTCATCAGCTATCCTTTCAGCTCCTGCTGTTCTGTCTTCTC
CAGGACAAGATAAGGCAGAATCTACCAACCAAAATTTGCCACCTGCAGAT
CAGTCTTCTTCCCAGAGTGAGACCATTGAACCTGAAGACCCTACTGAGGA
AGATATGGACACATTCTTTACTAGCTTAGAGTCTGAGCTCGCAAGCGGGA
ACATGGTTTCTTCTCAAGAAGAAGCAAAGGAAGCTCTGGTCAACATAGAT
GAAGCCCTGAACATGGCCCCAGCTAACTTTTATGATTCAGGGATGATTTC
TTCACTTAAGAAGGCTTTCAAGGTCCTATCTTGTTTTGATTGTTCCTCTA
CCTTTACGATTGAGCAAAAAAATGAGTTGTTGGCCATGGAGGAGAACTTT
AAACAACTACCTGAGCGAGTGGTGAAAGCAGTGCAGGACAAGAATCTCCT
TACTGAGAAGGAATCTGTCAAGCTGGCACTTTCTCGTAATTTAGAGGATA
GTTTAGTCAAATTTAAAGAGGCCAAGGCAGAGGTGAAACAGGCAGAGCAA
AAACTTGCCTCTCTCCATGAGCAAGTTGTTGAGGCACAAAAGAATAAAGA
GAATATCTTGGCTGAGCGGAAGGAAATTTTCAAAATTTCCCAGGACTTGA
AAGCGCAGCGGGACGCAATGGGAAAGGAATGGCCAGAGTATGCGGCCAAG
GCCAAGGTTGCTGAGGAGGAGGAGAAAAGTGTCGAGGCAGAATGGGGAAG
AATGAAAGACTTCATCTCTTCTCTCAAAGGAAAGATTTAA
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protein sequence of TcUnv2_p000140.1

>TcUnv2_p000140.1 ID=TcUnv2_p000140.1|Name=TcUnv2_p000140.1|organism=Theobroma cacao|type=polypeptide|length=480bp
MHKERMSMNEQRRVKDWIEHGLELEVDSSESQSVESQQVRKCTWRIENFS
CIKCKKLYSNTFHVGGNKWRLLVFPKGNPQWNRVDHISFYVDVADAATLP
YGWSRYAQLRLTVVNQIDRKYSITKVTDHEFNAKENDWGFTSFMPLDELL
DPKRGYLVNDACLVEAYIATDRTIDLLSDALIVELETASDKLKSKEADHG
KAAIDNQKTAIAEPEEITTRSSAILSAPAVLSSPGQDKAESTNQNLPPAD
QSSSQSETIEPEDPTEEDMDTFFTSLESELASGNMVSSQEEAKEALVNID
EALNMAPANFYDSGMISSLKKAFKVLSCFDCSSTFTIEQKNELLAMEENF
KQLPERVVKAVQDKNLLTEKESVKLALSRNLEDSLVKFKEAKAEVKQAEQ
KLASLHEQVVEAQKNKENILAERKEIFKISQDLKAQRDAMGKEWPEYAAK
AKVAEEEEKSVEAEWGRMKDFISSLKGKI*
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