TcUnv2_t000130.1

Overview
NameTcUnv2_t000130.1
Unique NameTcUnv2_t000130.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length1359
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 2 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
ProductMATH domain and coiled-coil domain-containing protein At3g58270
NoteUbiquitin-specific protease 12 isoform 1
Cross References
External references for this mRNA
DatabaseAccession
GeneID18586887
GenbankXM_007010467.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
TcUnv2_g000130TcUnv2_g000130Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
TcUnv2_p000130.1TcUnv2_p000130.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto515470auto515470Theobroma cacaoexon
exon-auto515471auto515471Theobroma cacaoexon
exon-auto515472auto515472Theobroma cacaoexon
exon-auto515473auto515473Theobroma cacaoexon
exon-auto515474auto515474Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto515475auto515475Theobroma cacaoCDS
CDS-auto515476auto515476Theobroma cacaoCDS
CDS-auto515477auto515477Theobroma cacaoCDS
CDS-auto515478auto515478Theobroma cacaoCDS
CDS-auto515479auto515479Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>TcUnv2_t000130.1 ID=TcUnv2_t000130.1|Name=TcUnv2_t000130.1|organism=Theobroma cacao|type=mRNA|length=1359bp
ATGGAAGTGGATAGAAGTGAGTCTCAGTCTATGGGAAGTCAACAAGTGAG
AAAGTTCACATGGAGGATTGAGAATTTCTCCTGTATTAAATGCAACAAGC
TCTACTCTGACATCTTCCATGTTGGTGGCAACAAATGGCAACTTCTTGTC
TTCCCAAAGGGGAACAAGGTGGATCATATTTCAATTTATGTAGATGCTGC
AGATTCAGCAACTTTGCCTCCTGGCTGGAGTAGATATGCCCAATTCAGAT
TATCTGTCATCAACCAAACTGATCCTAAAACTTCGATTACAAAAGTCACT
AATCATGAGTTTAATGCAAAGGAGAATGATTGGGGCTTCACTTCATTCAT
GCCTCTCGATGAATTACTCGACCCTAAGAGAGGCTATCTCGTGAATGATG
CATGCTTAGTTGAAGCTTACATTGCCACCGATAGGACTATTGATTTGCTG
TCAGATGCATTGATAGTTGAACTTGAAACTGCTTCTGATAAACTCAAGAG
CAAGGAAGCTGATCACGGTGAAGCAGCCATAGACAACCAAAAACCTACAA
TAGTCAAACCAGAGGAAATCACCACTCAGTCATCAGCTATCCTTTCAGCT
CCTGCGGTTCTGTCTTCTCCAGGACAGGATGAGGCAGAATCTACCAATCA
AAAATTGCCAACTGCGGATCAGTCTTCTTCCCAGAGTGAGACCATTGAAC
CTGAAGACCCTACTGAGGAAGATATGGACACATTCTTTACTAGCTTAGAG
TCTGAGCTCGCAAGAAGTAACATTGTTTCTTCTCAAGAAGAAGCAAAGGA
AGCTCTGGTCAACATAGATGAAGCCCTGAATATGGCCCCAGCTAACTTTT
ATGATTCAGGGATGATTTCTTCACTTAAGAAGGCTTTCAAGGTCCTATCT
AGTGTTGATTGTTCCTCTACCTTTACGATTGAGCTAAAAGATGAGTTGTT
GGCCATGGAGGAGAACTTTAAACAACTACCTGAGCGAGTAGTGAAAGCAG
TGCAGGACAAGAATCTCCTTAGTGAGAAGGAATCTGTCAAGCTGGCACTT
ACTCGTAATTTAGAGGATAGTCTAATCAAATTTAAAGAGGCCAAGGCAGA
GGCGAAACAGGTAGAGCAAAAACTTGCTGCCCTCCATGAGCAAGTTGCTG
AGGCACAAAAGAATAAAGAGAATATCTTGGCTGAGCGGAAGGAAATTTTC
AAAATTTCCCAGGACTTGAAAGCGCAGCTGAATGCATTGGGAAAGGAATG
GCCAGAGTATGTGGCCAAGGCCAAGGTTGCTGAGGAGGAGGAGAAAAGTG
TCGAGGCAGAATGGGGAAGAATGAAAGGCTTCATCTCTTCTCTCAAAGGA
AAGATTTAA
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protein sequence of TcUnv2_p000130.1

>TcUnv2_p000130.1 ID=TcUnv2_p000130.1|Name=TcUnv2_p000130.1|organism=Theobroma cacao|type=polypeptide|length=453bp
MEVDRSESQSMGSQQVRKFTWRIENFSCIKCNKLYSDIFHVGGNKWQLLV
FPKGNKVDHISIYVDAADSATLPPGWSRYAQFRLSVINQTDPKTSITKVT
NHEFNAKENDWGFTSFMPLDELLDPKRGYLVNDACLVEAYIATDRTIDLL
SDALIVELETASDKLKSKEADHGEAAIDNQKPTIVKPEEITTQSSAILSA
PAVLSSPGQDEAESTNQKLPTADQSSSQSETIEPEDPTEEDMDTFFTSLE
SELARSNIVSSQEEAKEALVNIDEALNMAPANFYDSGMISSLKKAFKVLS
SVDCSSTFTIELKDELLAMEENFKQLPERVVKAVQDKNLLSEKESVKLAL
TRNLEDSLIKFKEAKAEAKQVEQKLAALHEQVAEAQKNKENILAERKEIF
KISQDLKAQLNALGKEWPEYVAKAKVAEEEEKSVEAEWGRMKGFISSLKG
KI*
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