Tc10v2_t012710.1

Overview
NameTc10v2_t012710.1
Unique NameTc10v2_t012710.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length498
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 5 Proteins
Productputative E3 ubiquitin-protein ligase SINAT1
NoteE3 ubiquitin-protein ligase
Cross References
External references for this mRNA
DatabaseAccession
GeneID18587318
GenbankXM_018128904.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc10v2_g012710Tc10v2_g012710Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc10v2_p012710.1Tc10v2_p012710.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto510498auto510498Theobroma cacaoexon
exon-auto510499auto510499Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto510500auto510500Theobroma cacaoCDS
CDS-auto510501auto510501Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc10v2_t012710.1 ID=Tc10v2_t012710.1|Name=Tc10v2_t012710.1|organism=Theobroma cacao|type=mRNA|length=498bp
ATGGTCCTGATGAGGGGAAATTTGCATAATGGCTTGTATCGTCTAGAATG
TGAGGCCTTGAAAGGATGGGAACAGTGCACAGGGGATGGTAGCTACCAAA
GTGAGATTTCATTTGCTGAGGAGGTGATGAAAGTTTCCCATGGTGTAGAC
GATGGTGAAAGGATGAAAAATCTTGCCAGTAGTGAATTGGAAGGGTTGTC
GAGGTCCCTTTCCGAAGTTTTCAGTTGCTTTGGTCAACACTTTTGCCTGC
ACTTCGAAGCATTCCAGCTTGGGATGGCTTCTGTTTATATAGCATTCTTG
CGGTTTAGGGGTGACGATGATGAGGCAAAGAACTATAGCTACAGTCTCGA
GGTAGGTGGGAATGGGAGGAAGATGACTTGGCAAGGGGTGCCCAGGAGCA
TAAGGGACAATCACAGGAAGGTTCGTGACAGTTTGATGGTCTCATCATCC
AACGTAACATGGCTTTGTTCTTCTCAGGGGGAGACCGGAAAGAATTGA
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protein sequence of Tc10v2_p012710.1

>Tc10v2_p012710.1 ID=Tc10v2_p012710.1|Name=Tc10v2_p012710.1|organism=Theobroma cacao|type=polypeptide|length=166bp
MVLMRGNLHNGLYRLECEALKGWEQCTGDGSYQSEISFAEEVMKVSHGVD
DGERMKNLASSELEGLSRSLSEVFSCFGQHFCLHFEAFQLGMASVYIAFL
RFRGDDDEAKNYSYSLEVGGNGRKMTWQGVPRSIRDNHRKVRDSLMVSSS
NVTWLCSSQGETGKN*
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