Tc10v2_t012700.1

Overview
NameTc10v2_t012700.1
Unique NameTc10v2_t012700.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length678
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
ProductDNA-damage-repair/toleration protein DRT100-like, transcript variant X2
NoteHypothetical protein
Cross References
External references for this mRNA
DatabaseAccession
GeneID108663575
GenbankXM_018128732.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc10v2_g012700Tc10v2_g012700Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc10v2_p012700.1Tc10v2_p012700.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto510485auto510485Theobroma cacaoexon
exon-auto510486auto510486Theobroma cacaoexon
exon-auto510487auto510487Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto510488auto510488Theobroma cacaoCDS
CDS-auto510489auto510489Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc10v2_t012700.1 ID=Tc10v2_t012700.1|Name=Tc10v2_t012700.1|organism=Theobroma cacao|type=mRNA|length=678bp
ATGACCAGCACAAGTATGTTTTTAATGCTGAGGTCCTTTCTATTTCTACT
TATTTTTTTTGGGCTTTGCCAATGCATGAGAATTGCAAATGGCTTCAACC
CAAGTGCCAGAGAAGCGAAGATCCAATGCATAGAGAAGGAGAGACATGCT
CTGCTTATGGTCAAGCAAAGTCTCATCGATGATTATGGTCATCTCTCCTC
TTGGGGAAATGAAGATGGAAATAAAGATTGTTGTCTATGGAGAGGTGTCC
GATGTAGCAGTAGAACACGCCATGTAATCAAGCTTGATCTTAGTAGCCCT
GGGACTTGGGATCATGACTCGTTCCAGCATAATTCTCTAAGAGGAAAAGT
TCCAACGGGTACTCAACTCCAATCCCTTGAGGCTTCAGCCTTTATGGGAA
ATCAAGCACTGTACGGGCCTCCAATTACACAACAGTGCCCCAAAAATGAC
ACGTTTCAACCTCAACCACCTGAAGAAGAGAGGGATGAATTCAATAGATG
GTTTTATGTTGGAATGGGAATCGGATTCTTCATGGCGTTTTGGGGAGTTT
TTGGCACTCTACTGTTGAAGCGTTCTTGGAGGCATGCATATTTTCGACTC
TTGGATAACTGGACGGACTCACTGTACGTGACATCCATGCTGTCGAGTGC
AAGATTGGTAAGGAAGTTCAAAAGTTAG
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protein sequence of Tc10v2_p012700.1

>Tc10v2_p012700.1 ID=Tc10v2_p012700.1|Name=Tc10v2_p012700.1|organism=Theobroma cacao|type=polypeptide|length=226bp
MTSTSMFLMLRSFLFLLIFFGLCQCMRIANGFNPSAREAKIQCIEKERHA
LLMVKQSLIDDYGHLSSWGNEDGNKDCCLWRGVRCSSRTRHVIKLDLSSP
GTWDHDSFQHNSLRGKVPTGTQLQSLEASAFMGNQALYGPPITQQCPKND
TFQPQPPEEERDEFNRWFYVGMGIGFFMAFWGVFGTLLLKRSWRHAYFRL
LDNWTDSLYVTSMLSSARLVRKFKS*
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