Tc10v2_t011470.4

Overview
NameTc10v2_t011470.4
Unique NameTc10v2_t011470.4
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length405
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
Productuncharacterized LOC18587111, transcript variant X5
NotePutative Glucan endo-1,3-beta-glucosidase, basic vacuolar isoform GLB
Cross References
External references for this mRNA
DatabaseAccession
GeneID18587111
GenbankXM_018128563.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc10v2_g011470Tc10v2_g011470Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc10v2_p011470.4Tc10v2_p011470.4Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto508311auto508311Theobroma cacaoexon
exon-auto508312auto508312Theobroma cacaoexon
exon-auto508313auto508313Theobroma cacaoexon
exon-auto508314auto508314Theobroma cacaoexon
exon-auto508315auto508315Theobroma cacaoexon
exon-auto508316auto508316Theobroma cacaoexon
exon-auto508317auto508317Theobroma cacaoexon
exon-auto508318auto508318Theobroma cacaoexon
exon-auto508319auto508319Theobroma cacaoexon
exon-auto508320auto508320Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto508321auto508321Theobroma cacaoCDS
CDS-auto508322auto508322Theobroma cacaoCDS
CDS-auto508323auto508323Theobroma cacaoCDS
CDS-auto508324auto508324Theobroma cacaoCDS
CDS-auto508325auto508325Theobroma cacaoCDS
CDS-auto508326auto508326Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc10v2_t011470.4 ID=Tc10v2_t011470.4|Name=Tc10v2_t011470.4|organism=Theobroma cacao|type=mRNA|length=405bp
ATGAAAAAGACAAAAGTTCAGCCGGAGTCCACCTCGATGGTGCAACCTGA
AGAGAAAATCGGTGAAGGAGAAGATGTGAAAAATAGAGAAGATAATATAA
GCCGGGACTCCGGTGGTTTCTCAAACAGCTATGGGACTAATCTTTCCCTT
TATACAACTGAAAAAAGGTGGTACAGGGTAGGCTTGTTAGAGATGAATGA
ACGTGATGAGCAGGTAGCTTTGCTGTTAGACGTGCTTAAATGTATCTGTT
TGTTTCAAGCTTACATGACTTATGCACAGGCTCAAAAATTCCATGCTCAG
GAAGAAGTTAAGTATGTTGCAATTGTTTCACCGAGTGACAATGTTCAGTC
TGCAAAACGAACCAAGTCCGGAATTTTGGAGGGTAGACCAAAATCGAAGA
AATAA
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protein sequence of Tc10v2_p011470.4

>Tc10v2_p011470.4 ID=Tc10v2_p011470.4|Name=Tc10v2_p011470.4|organism=Theobroma cacao|type=polypeptide|length=135bp
MKKTKVQPESTSMVQPEEKIGEGEDVKNREDNISRDSGGFSNSYGTNLSL
YTTEKRWYRVGLLEMNERDEQVALLLDVLKCICLFQAYMTYAQAQKFHAQ
EEVKYVAIVSPSDNVQSAKRTKSGILEGRPKSKK*
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