Tc10v2_t011120.2

Overview
NameTc10v2_t011120.2
Unique NameTc10v2_t011120.2
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length1026
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
Productprobable choline kinase 2, transcript variant X2
NoteProbable choline kinase 2
Cross References
External references for this mRNA
DatabaseAccession
GeneID18587073
GenbankXM_018129432.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc10v2_g011120Tc10v2_g011120Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc10v2_p011120.2Tc10v2_p011120.2Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto507346auto507346Theobroma cacaoexon
exon-auto507347auto507347Theobroma cacaoexon
exon-auto507348auto507348Theobroma cacaoexon
exon-auto507349auto507349Theobroma cacaoexon
exon-auto507350auto507350Theobroma cacaoexon
exon-auto507351auto507351Theobroma cacaoexon
exon-auto507352auto507352Theobroma cacaoexon
exon-auto507353auto507353Theobroma cacaoexon
exon-auto507354auto507354Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto507355auto507355Theobroma cacaoCDS
CDS-auto507356auto507356Theobroma cacaoCDS
CDS-auto507357auto507357Theobroma cacaoCDS
CDS-auto507358auto507358Theobroma cacaoCDS
CDS-auto507359auto507359Theobroma cacaoCDS
CDS-auto507360auto507360Theobroma cacaoCDS
CDS-auto507361auto507361Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc10v2_t011120.2 ID=Tc10v2_t011120.2|Name=Tc10v2_t011120.2|organism=Theobroma cacao|type=mRNA|length=1026bp
ATGGGTGCCTCAACTAATAAAGAGAACAGGTTGCCACGGGAAGCAAAGGA
TGCTCTACAATTGTTGGCTTCTGATTGGGATGATGTGGTGGACTCAAAAG
CTTTGCAGGTGATCCCTCTTAAAGGTGCAATGACCAATCAGGTCTTCCAA
ATAAAATGGCCAACTAGGACAGATGAAGTGTCACGAAAGGTTTTAGTTAG
GATTTATGGTGAGGGTGTGGAGGTGTTTTTTGACCGGGACAATGAGATCC
GTACTTTTGAGTTTATGTCGAAACATGGGCAAGGACCTCGTTTGCTTGGA
CGGTTCCCAAATGGGCGAATTGAAGAGTTCATCCGTGCACGGATACTATC
TGCATCTGATTTGCGTGATCCAAATGTATCAGCTCTAATAGCAGCTAAAT
TGAGGGAGTTCCATGAACTAGACATGCCTGGTCCAAAGAAAGTTTGGCTA
TGGGATAGATTGCAAAATTGGCTAAATGCGGCCAAGAGAGTCTGCCCTCT
GGAAGAAGCTAAAGCCCTTCGCTTGGAAGTTATTGAGGAGGAAATCTCAA
TGTTAGAAAAGAAACTCTCAGGGTGCCATCAACACATAGGTTTCTGCCAC
AATGATTTACAATATGGTAACATTATGATCGACGAAGAGACTAAATCAAT
AACCATTATTGATTACGAGTATGCAAGTTACAATCCTGTTGCCTATGATA
TTGCAAACCACTTTTGTGAGATGGCTGCTGACTATCATACAGAAATGCCC
CATATTATGGATTATAGTAAATATCCAGGTTGGGGAGAGCGCTTAAGATT
TCTGCGTATATACCTGCACTCTTCAGGTAAGGAACCCAGAGACACTGAAG
TGGACCAGCTGCTTAAAGATGTCGAGAAGTTTACTCTAGCAAGTCATCTC
ACTTGGGGCTTATGGGGAATAATATCGGAACATGTGAATGAAATTGACTT
TGACTACAAGGAGTATGCCAAGCAGAGGTTTCAGCAGTATTGGATGCAGA
GGCCTGAGCTGTTGGGCACTTCTTGA
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protein sequence of Tc10v2_p011120.2

>Tc10v2_p011120.2 ID=Tc10v2_p011120.2|Name=Tc10v2_p011120.2|organism=Theobroma cacao|type=polypeptide|length=342bp
MGASTNKENRLPREAKDALQLLASDWDDVVDSKALQVIPLKGAMTNQVFQ
IKWPTRTDEVSRKVLVRIYGEGVEVFFDRDNEIRTFEFMSKHGQGPRLLG
RFPNGRIEEFIRARILSASDLRDPNVSALIAAKLREFHELDMPGPKKVWL
WDRLQNWLNAAKRVCPLEEAKALRLEVIEEEISMLEKKLSGCHQHIGFCH
NDLQYGNIMIDEETKSITIIDYEYASYNPVAYDIANHFCEMAADYHTEMP
HIMDYSKYPGWGERLRFLRIYLHSSGKEPRDTEVDQLLKDVEKFTLASHL
TWGLWGIISEHVNEIDFDYKEYAKQRFQQYWMQRPELLGTS*
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