Tc10v2_t010470.1

Overview
NameTc10v2_t010470.1
Unique NameTc10v2_t010470.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length1575
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 9 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
Productcalcium and calcium/calmodulin-dependent serine/threonine-protein kinase
NoteCalcium and calcium/calmodulin-dependent serine/threonine-protein kinase DMI-3
Cross References
External references for this mRNA
DatabaseAccession
GeneID18586974
GenbankXM_007010598.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc10v2_g010470Tc10v2_g010470Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc10v2_p010470.1Tc10v2_p010470.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto506488auto506488Theobroma cacaoexon
exon-auto506489auto506489Theobroma cacaoexon
exon-auto506490auto506490Theobroma cacaoexon
exon-auto506491auto506491Theobroma cacaoexon
exon-auto506492auto506492Theobroma cacaoexon
exon-auto506493auto506493Theobroma cacaoexon
exon-auto506494auto506494Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto506495auto506495Theobroma cacaoCDS
CDS-auto506496auto506496Theobroma cacaoCDS
CDS-auto506497auto506497Theobroma cacaoCDS
CDS-auto506498auto506498Theobroma cacaoCDS
CDS-auto506499auto506499Theobroma cacaoCDS
CDS-auto506500auto506500Theobroma cacaoCDS
CDS-auto506501auto506501Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc10v2_t010470.1 ID=Tc10v2_t010470.1|Name=Tc10v2_t010470.1|organism=Theobroma cacao|type=mRNA|length=1575bp
ATGGGACAGGAGAAAGGAAAACTATGCGATGAATATGAAATCCAGGACAT
CCTAGGAAGAGGAGGATTCTCAGTTGTGAGGAGAGGCATAAAGATCAAAA
CAGATGGGCAGAAAAGTAGTCAACAGGTAGCCATCAAGACACTAAAAAGA
TTTGGCACTTCAGCTTCAACCCCATCAGGGAGTTTTCGAGTCAGCGCTGA
GAAAAGCATAGCTTCAATGGGATTACCAGCATGGAATCAGGTTTCCATCT
CGGATGCCTTGTTAACCAATGAGATTTTGGTTATGAGAAAGATTGTGGAA
AATGTTTCACCCCATCCAAACGTGATTGATCTCTATGATGTCTATGAGGA
CCAAAGTGGGGTGCACTTAGTGTTAGAGCTATGCTCAGGAGGGGAGCTGT
TTGATCGGATTGTGGCTCAGGAAAGGTACTCGGAGGCTGGAGCTGCAGCT
GTAGTTAAGCAGATTGCTCAAGGATTGGCAGCTCTTCACCAGGCTAACAT
TGTCCACAGGGATCTTAAGCCTGAGAATTGCCTCTTCTTCAATAAGAGTG
ATGATTCCACATTGAAGATCATGGACTTCGGATTAAGTTCAGTGGAAGAG
TTTACTGATCCAGTTGTTGGGTTATTTGGTTCTATAGATTATGTATCACC
AGAGGCTCTTTCTCAAGGCAAAATCACTTTCAAGAGTGACATGTGGTCTT
TGGGAGTCATCCTATATATCTTGCTCTCTGGGTATCCACCATTTATTGCT
CAATCGAATCGCCAAAAACAGCAGATGATAATGGCTGGAGATTATAATTT
TGATGAGAGGACTTGGAAAAACATTTCTTCATCAGCAAAGCATTTGATTT
CTAATCTGCTGCAAGTTGATTCTGACAGAAGACCAAGTGCTGAACAACTT
CTGGCTCATCCATGGGTCATTGGAGATTCAGCCAAACAGGAACAAATGGA
TGCTGAGGTTGTGTCAAGACTGCAGAGTTTTAATGCACGCCGCAAACTTC
GAGCTGCAGCAATAGCTAGCGTGTTGAGCAGCAAGGTTTTGCTGAGAACA
AAGAAGCTAAGGACTCTGCTTGGTTCCCATGACCTTACCAAGGAGGAAAT
TGACAACCTGAAGATATATTTTAAGAACATATGTGCTAAAGGTGACAATG
CTACCCTACCTGAATTTGAAGAGGTGCTAAAAGCAATGAACATGTCCTCA
CTACTCCCTCTGGCTACCCGTATCTTTGATCTGTTTGACAGCAATCGTGA
TGGAACCGTTGACATGAGGGAAATAGTGTGTGGATTTTCCAGCCTTAGAA
ACTCCAAAGGAGATGATGCTCTCCGTTTGTGCTTTGAGATGTATGATACA
GATCGATCTGGTTGCATTACAAGGGAAGAACTAGCATCAATGCTTAGAGC
TTTGCCAGATGACTGTCTTCCACCGGATATAACAGAACCTGGAAAGTTAG
ACGAAATATTTGACCGGATGGATGCAAACAGTGATGGAAAGGTTACTTTC
GATGAATTCAAAGCTGCCATGCAAAGAGATAGCTCCCTCCAAGACGTTGT
CCTTTCTTCTCTTCGTCAGCAATAG
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protein sequence of Tc10v2_p010470.1

>Tc10v2_p010470.1 ID=Tc10v2_p010470.1|Name=Tc10v2_p010470.1|organism=Theobroma cacao|type=polypeptide|length=525bp
MGQEKGKLCDEYEIQDILGRGGFSVVRRGIKIKTDGQKSSQQVAIKTLKR
FGTSASTPSGSFRVSAEKSIASMGLPAWNQVSISDALLTNEILVMRKIVE
NVSPHPNVIDLYDVYEDQSGVHLVLELCSGGELFDRIVAQERYSEAGAAA
VVKQIAQGLAALHQANIVHRDLKPENCLFFNKSDDSTLKIMDFGLSSVEE
FTDPVVGLFGSIDYVSPEALSQGKITFKSDMWSLGVILYILLSGYPPFIA
QSNRQKQQMIMAGDYNFDERTWKNISSSAKHLISNLLQVDSDRRPSAEQL
LAHPWVIGDSAKQEQMDAEVVSRLQSFNARRKLRAAAIASVLSSKVLLRT
KKLRTLLGSHDLTKEEIDNLKIYFKNICAKGDNATLPEFEEVLKAMNMSS
LLPLATRIFDLFDSNRDGTVDMREIVCGFSSLRNSKGDDALRLCFEMYDT
DRSGCITREELASMLRALPDDCLPPDITEPGKLDEIFDRMDANSDGKVTF
DEFKAAMQRDSSLQDVVLSSLRQQ*
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