Tc10v2_t010100.4

Overview
NameTc10v2_t010100.4
Unique NameTc10v2_t010100.4
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length669
Properties
Property NameValue
NoteGlutathione S-transferase zeta class
Model evidenceSupporting evidence includes similarity to: 17 ESTs, 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
Productglutathione S-transferase zeta class, transcript variant X1
Cross References
External references for this mRNA
DatabaseAccession
GeneID18586923
GenbankXM_007010515.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc10v2_g010100Tc10v2_g010100Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc10v2_p010100.4Tc10v2_p010100.4Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto505121auto505121Theobroma cacaoexon
exon-auto505122auto505122Theobroma cacaoexon
exon-auto505123auto505123Theobroma cacaoexon
exon-auto505124auto505124Theobroma cacaoexon
exon-auto505125auto505125Theobroma cacaoexon
exon-auto505126auto505126Theobroma cacaoexon
exon-auto505127auto505127Theobroma cacaoexon
exon-auto505128auto505128Theobroma cacaoexon
exon-auto505129auto505129Theobroma cacaoexon
exon-auto505130auto505130Theobroma cacaoexon
exon-auto505131auto505131Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto505132auto505132Theobroma cacaoCDS
CDS-auto505133auto505133Theobroma cacaoCDS
CDS-auto505134auto505134Theobroma cacaoCDS
CDS-auto505135auto505135Theobroma cacaoCDS
CDS-auto505136auto505136Theobroma cacaoCDS
CDS-auto505137auto505137Theobroma cacaoCDS
CDS-auto505138auto505138Theobroma cacaoCDS
CDS-auto505139auto505139Theobroma cacaoCDS
CDS-auto505140auto505140Theobroma cacaoCDS
CDS-auto505141auto505141Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc10v2_t010100.4 ID=Tc10v2_t010100.4|Name=Tc10v2_t010100.4|organism=Theobroma cacao|type=mRNA|length=669bp
ATGGCACATGAGGAGAAGAAACTGAAGCTCTATTCTTACTGGAGGAGCTC
CTGCTCCTGCCGAATCCGGATTGCCCTCAACCTCAAAGGTCTGGAGTACC
AGTACATACCCGTTAACTTGCTCAAGGGGGAGCAATTCAGTCCTGAATTT
CAAAAGCTGAATCCCATTGGGTATGTGCCGGTGCTGGTGGATGGTGACAT
TGTCATTTCAGACTCTTTTGCCATTTTCATGTATCTGGAGGAGAAATACC
CTCAACATCCGCTGTTGCCATCTGATCTTCAAAAAAAGGCACTCAATTTC
CAGGCTGCAAATATTGTTTGCTCAAGCATACAGCCTCTTCAGAATCTAGC
TGTACTGAAATACATTGAGGAAAAAGCAAGTCCAGATGAGAAAATTCCTT
GGGCAAAACGTCATATTGAGAAGGGCTTTGAAGCACTTGAGAAGTTGTTA
AAGGACCATGCTGGAATATATGCAACTGGAGATGAAGTTTTCATGGCTGA
TCTGTTTCTAGCACCACAGGTTCATGCTGGGATTAAAAGATTCAATGTTG
ACATGGCTAAATTCCCGCTTTTATCTAGGTTGAATGAGGCATATAGTGAG
CTACCACATTTCCAAAATGCTATGCCAGAGAATCAACCAGATAGTCCTTC
AGCATGGGGCACTTGTTAA
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protein sequence of Tc10v2_p010100.4

>Tc10v2_p010100.4 ID=Tc10v2_p010100.4|Name=Tc10v2_p010100.4|organism=Theobroma cacao|type=polypeptide|length=223bp
MAHEEKKLKLYSYWRSSCSCRIRIALNLKGLEYQYIPVNLLKGEQFSPEF
QKLNPIGYVPVLVDGDIVISDSFAIFMYLEEKYPQHPLLPSDLQKKALNF
QAANIVCSSIQPLQNLAVLKYIEEKASPDEKIPWAKRHIEKGFEALEKLL
KDHAGIYATGDEVFMADLFLAPQVHAGIKRFNVDMAKFPLLSRLNEAYSE
LPHFQNAMPENQPDSPSAWGTC*
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