Tc10v2_t009980.1

Overview
NameTc10v2_t009980.1
Unique NameTc10v2_t009980.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length783
Properties
Property NameValue
Note3-oxo-5-alpha-steroid 4-dehydrogenase family protein, putative
Model evidenceSupporting evidence includes similarity to: 2 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
Productvery-long-chain enoyl-CoA reductase
Cross References
External references for this mRNA
DatabaseAccession
GeneID18586904
GenbankXM_018128693.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc10v2_g009980Tc10v2_g009980Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc10v2_p009980.1Tc10v2_p009980.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto504720auto504720Theobroma cacaoexon
exon-auto504721auto504721Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto504722auto504722Theobroma cacaoCDS
CDS-auto504723auto504723Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc10v2_t009980.1 ID=Tc10v2_t009980.1|Name=Tc10v2_t009980.1|organism=Theobroma cacao|type=mRNA|length=783bp
ATGTTGCTGAAATATCTATTCCCACCTTCCCTGTTCTTCACTGCAACTTC
TTTGCTAACTTTGGCCTCCATGGCGAACGGTGGGTTATCAGAAGTAAGAG
GGAAACATGTGCAATATTCCAAGTTCTTTGGTGTGGGTTCACAGGCTTCG
AAAGCATCCCAGATTACGCTGTCAACCAGAGCTGCCATGGTTATACTTTA
TACACCAGGCTTCCTCAACGGGGTCGCTTCATTCCTGCTTTTCCCGGATG
AGGGTTTCAGATTTCTGTTGCTGAAATCTGCGATAACCATCCATTTCGGC
AAGAGAGTTTTTGAGGCCCTTTTTATTCATAAATACAGTGGTAACATGGG
TCTTGACACACTGATATTCATACTTGTGAGTTATTTGATATCCAGGCCCT
TTTGTTACTCGCAACACCTCACACAGGGAGTCCCAGAGCCACCAGTTGAT
TTGAAATACCCTGGAATTGTTTTGTTTCTAGTAGGAGTAAGTGGAAACTT
CTACCATCATTACCTCCTCTCCAAGCTGAGAGGAAAAGGTGCCAAAGAAT
ACAAGATTCCCAAGGGTGGTTTATTTGCATTAGTGGCATGCCCTCACTAT
CTATTTGAGGTTTTAGGGTTTTGGGGAATCACTTTCATTTCCCAAACATT
ATATACATTTTCATTCACTCTAGGCTCTACCTTGTACTTGATGGGTAGGA
GTTATGCCACTAGGAGATGGTACCTTTCCAAATTTGAAGATTTCCCAGAG
GGAGTCAGGGCTATGATTCCATACATATTCTAG
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protein sequence of Tc10v2_p009980.1

>Tc10v2_p009980.1 ID=Tc10v2_p009980.1|Name=Tc10v2_p009980.1|organism=Theobroma cacao|type=polypeptide|length=261bp
MLLKYLFPPSLFFTATSLLTLASMANGGLSEVRGKHVQYSKFFGVGSQAS
KASQITLSTRAAMVILYTPGFLNGVASFLLFPDEGFRFLLLKSAITIHFG
KRVFEALFIHKYSGNMGLDTLIFILVSYLISRPFCYSQHLTQGVPEPPVD
LKYPGIVLFLVGVSGNFYHHYLLSKLRGKGAKEYKIPKGGLFALVACPHY
LFEVLGFWGITFISQTLYTFSFTLGSTLYLMGRSYATRRWYLSKFEDFPE
GVRAMIPYIF*
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