Tc10v2_t009470.1

Overview
NameTc10v2_t009470.1
Unique NameTc10v2_t009470.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length1635
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 5 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
Productglutamyl-tRNA(Gln) amidotransferase subunit A, chloroplastic/mitochondrial
NoteGlutamyl-tRNA(Gln) amidotransferase subunit A, chloroplastic/mitochondrial
Cross References
External references for this mRNA
DatabaseAccession
GeneID18586820
GenbankXM_018129052.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc10v2_g009470Tc10v2_g009470Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc10v2_p009470.1Tc10v2_p009470.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto503932auto503932Theobroma cacaoexon
exon-auto503933auto503933Theobroma cacaoexon
exon-auto503934auto503934Theobroma cacaoexon
exon-auto503935auto503935Theobroma cacaoexon
exon-auto503936auto503936Theobroma cacaoexon
exon-auto503937auto503937Theobroma cacaoexon
exon-auto503938auto503938Theobroma cacaoexon
exon-auto503939auto503939Theobroma cacaoexon
exon-auto503940auto503940Theobroma cacaoexon
exon-auto503941auto503941Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto503942auto503942Theobroma cacaoCDS
CDS-auto503943auto503943Theobroma cacaoCDS
CDS-auto503944auto503944Theobroma cacaoCDS
CDS-auto503945auto503945Theobroma cacaoCDS
CDS-auto503946auto503946Theobroma cacaoCDS
CDS-auto503947auto503947Theobroma cacaoCDS
CDS-auto503948auto503948Theobroma cacaoCDS
CDS-auto503949auto503949Theobroma cacaoCDS
CDS-auto503950auto503950Theobroma cacaoCDS
CDS-auto503951auto503951Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc10v2_t009470.1 ID=Tc10v2_t009470.1|Name=Tc10v2_t009470.1|organism=Theobroma cacao|type=mRNA|length=1635bp
ATGCTATCAACAATTCAACCGTCGCGTTGTCTGTCTCGCTTTCCAGTCCA
CTTACCTACCTGCGGCCGCACCAAATCTCGCTTTCTGCGCGTGGTCTCTT
CCGCTCAACCCGTCACCACAGCCCCACTCGCAGACCAATCACAAATCCTG
TCCATCCGCGACTCCCTCCTCTCCCGCCACCTCAGCGCAGTCCAAGTGGC
CGACTCCTACCTGGGCCGCTTGAAACAGACGGAGCCCCAAATTGGGTCTT
TCCTCCACCTATCCGAGCCGGACAAGGTGCTGAAACAGGCGCAGGAGATT
GATGACAAGATAAAGAGGAATGAGGAAGTGGGTCCCCTTGCTGGGGTCCT
TGTGGCTGTCAAGGACAACATTTGTACGGCTGATATGCCTTCTACCGGTG
GCTCCCACATTCTGGACGGGTACCGTCCGCCGTTCGATGCCACAGCCGTC
AAGAGGTTGAAGGACTTGGGCGCCATTGTGGTTGGCAAGACCAACTTGGA
TGAGTTTGGCATGGGGAGTAGTACTGAAGCTTCTGCTTTTAAGGTGACAG
CAAACCCGTGGGATCTCTCTCGGGTGCCAGGAGGATCATCCGGAGGCTCA
GCTGCAGCTGTTTCTGCCAGGCAATGTGTTGTATCACTTGGGAGTGATAC
CGGTGGAAGTGTGAGGCAGCCAGCATCATTTTGCGGGGTAGCTGGTTTGA
AGCCAACTTATGGCCGGGTCTCGAGATTTGGGCTTATGGCATATGCATCA
TCCCTTGATGTCATTGGATGTTTTGGTTCATCCGTTGCTGACACCGGGAT
TCTTCTTCATGCAATTTCTGGTCACGATGCACTTGATGCAACTAGCAGTA
AACGAGAGGTGCCTGATTTCACTTCTCAATTCCTTTCAGCAAGTTCTTTG
AAATCCAGACCATTGGAGGGGCTAAGGGTTGGTCTTATCCGTGAAACTGT
TGACGGTGGTGTTGATTCTGGAGTTAAATCTGCAATACAGGGTGCTGCAG
CTCATCTGGAACAATTAGGAAGTATTGTGACAGAGGTGTCATTGCCATCC
TTCTCTCTTGGTTTACCAGCTTACTATATTCTTGCATCATCAGAATCATC
TTCAAACTTATCCCGTTATGATGGTGTCAGATATGGAAACCAAGCTTCTT
GTGATGAGCTAAATGTACTTTATGAAGATTCCAGAGCTAAAGGATTTGGG
TCAGAGGTTAAAATGAGAATATTAATGGGAACATATGCACTTTCGGCTGG
CTATTATGATGCATATTACAAGCGTGCCCAGCAGGTAAGGACCATAATTC
AGAAAAGCTTCAAGGCAGCATTGGGTGAAAATGACATCCTGATTTCACCT
GCAGCTCCATCTGCTGCTTATAAGATTGGTGAAAAGAGAAATGATCCATT
AGCAATGTACGCAGGAGATATTATGACTGTCAATGTTAACTTGGCGGGCT
TACCTGCATTAGTTTTGCCATGTGGATTTGTTGAGGGGGGGTCTGCAGGT
CTTCCTGTTGGCCTTCAAATGATTGGTGCGGCATTTGATGAGGAAAAATT
GCTCAAAGTGGGTCATATCTTTGAGCAAACTCTTCAGGGTTACAAGTTTG
TTCCTCCACTCATTCAAGATGGTGTTTTTGCCTAA
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protein sequence of Tc10v2_p009470.1

>Tc10v2_p009470.1 ID=Tc10v2_p009470.1|Name=Tc10v2_p009470.1|organism=Theobroma cacao|type=polypeptide|length=545bp
MLSTIQPSRCLSRFPVHLPTCGRTKSRFLRVVSSAQPVTTAPLADQSQIL
SIRDSLLSRHLSAVQVADSYLGRLKQTEPQIGSFLHLSEPDKVLKQAQEI
DDKIKRNEEVGPLAGVLVAVKDNICTADMPSTGGSHILDGYRPPFDATAV
KRLKDLGAIVVGKTNLDEFGMGSSTEASAFKVTANPWDLSRVPGGSSGGS
AAAVSARQCVVSLGSDTGGSVRQPASFCGVAGLKPTYGRVSRFGLMAYAS
SLDVIGCFGSSVADTGILLHAISGHDALDATSSKREVPDFTSQFLSASSL
KSRPLEGLRVGLIRETVDGGVDSGVKSAIQGAAAHLEQLGSIVTEVSLPS
FSLGLPAYYILASSESSSNLSRYDGVRYGNQASCDELNVLYEDSRAKGFG
SEVKMRILMGTYALSAGYYDAYYKRAQQVRTIIQKSFKAALGENDILISP
AAPSAAYKIGEKRNDPLAMYAGDIMTVNVNLAGLPALVLPCGFVEGGSAG
LPVGLQMIGAAFDEEKLLKVGHIFEQTLQGYKFVPPLIQDGVFA*
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