Tc10v2_t008620.5

Overview
NameTc10v2_t008620.5
Unique NameTc10v2_t008620.5
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length1914
Properties
Property NameValue
NoteSerine/threonine-protein kinase CTR1
Model evidenceSupporting evidence includes similarity to: 2 ESTs, 6 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
Productserine/threonine-protein kinase CTR1, transcript variant X5
Cross References
External references for this mRNA
DatabaseAccession
GeneID18586721
GenbankXM_018128946.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc10v2_g008620Tc10v2_g008620Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc10v2_p008620.5Tc10v2_p008620.5Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto502743auto502743Theobroma cacaoexon
exon-auto502744auto502744Theobroma cacaoexon
exon-auto502745auto502745Theobroma cacaoexon
exon-auto502746auto502746Theobroma cacaoexon
exon-auto502747auto502747Theobroma cacaoexon
exon-auto502748auto502748Theobroma cacaoexon
exon-auto502749auto502749Theobroma cacaoexon
exon-auto502750auto502750Theobroma cacaoexon
exon-auto502751auto502751Theobroma cacaoexon
exon-auto502752auto502752Theobroma cacaoexon
exon-auto502753auto502753Theobroma cacaoexon
exon-auto502754auto502754Theobroma cacaoexon
exon-auto502755auto502755Theobroma cacaoexon
exon-auto502756auto502756Theobroma cacaoexon
exon-auto502757auto502757Theobroma cacaoexon
exon-auto502758auto502758Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto502759auto502759Theobroma cacaoCDS
CDS-auto502760auto502760Theobroma cacaoCDS
CDS-auto502761auto502761Theobroma cacaoCDS
CDS-auto502762auto502762Theobroma cacaoCDS
CDS-auto502763auto502763Theobroma cacaoCDS
CDS-auto502764auto502764Theobroma cacaoCDS
CDS-auto502765auto502765Theobroma cacaoCDS
CDS-auto502766auto502766Theobroma cacaoCDS
CDS-auto502767auto502767Theobroma cacaoCDS
CDS-auto502768auto502768Theobroma cacaoCDS
CDS-auto502769auto502769Theobroma cacaoCDS
CDS-auto502770auto502770Theobroma cacaoCDS
CDS-auto502771auto502771Theobroma cacaoCDS
CDS-auto502772auto502772Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc10v2_t008620.5 ID=Tc10v2_t008620.5|Name=Tc10v2_t008620.5|organism=Theobroma cacao|type=mRNA|length=1914bp
ATGGACCCTTATGCATGGACCATAAGTGCTGACCAAGGAGAGATTGGCCA
GATGCCATCGTTTGACTCATTGAAGGCCATTGATCCTCATGATGATTTGT
CAATTAAAGTTGTTCTGATTGATAAATTGAGGGATCCTAGATTGAGGGAA
CTTCAAAATTGTGTTCTCAAAATTTCTAGTAGCTGGGTCAGCACAAAAGA
TGTAATTGATCAGCTTGCACGTCTTGTCTGTAACCAAATGGGGGATGCAG
CCTCTTCTGAAGAAGGTGTTTATAGACAATGGAAGGAGTGCACCAAAGTT
CTGAAGGACTGCCTAGGCTCTATTGTGTTTCCAATTGGAAGCCTATCTTT
TGGCCTTTGTGTCCATCGTGCCTTACTGTTTAAGGTATTAGCAGACTTGG
TTAACCTACCATGCCGAATCACTAAGGGCTGTAAATATTGCCAGAGGGAA
GATGCTTCATCCTGTCTTGTGCAGTTGGGTGTTGACAGGGAATATTTGGT
TGATATGTTTGCAGAGCCGGGAGCCTTAAGCCGGCCAGATTCCTCACTAA
ATGGTACATCTTCAATTTTGGTTTCTTCACCGCTATGTCATCCAAGATTT
AAACAGGTTGAAACTGCTACAAGCATCAGGAAATTGTCCAAGCTCTATTT
TGTTGATGATCAATCATGTAAACACACATTTGATGATGCTTCCTCAGATA
ACGCTAGCAATCAAGATGAGCAAACTGGTCCACAGCTTAGTAAGGCATTT
GATATGAATTACTTTAACAAGAACAAGCTTGTTTCCACCTTAATCAACAA
CAATGGATCTACTCTGTCACCTCTGCACCAGAGAACCGCATGGAATATCT
ACTGTGATAAAGATCTTCAGATGCAAAACTCATCAAATTTGATACCAAAG
GCCATTGCCTCATCACATTTGGTCAGAAGTCCTCTTCTGCCAAGTTCTGT
CCCATCTGGTATGCAGAATGATGCTTGTCAAGCTTTAGCATTCTCTGATC
CAAGGCAATGTACTGCGAATTCTGTGCTGTTCAAGCAATCAGATCAGCCA
GTAATGAGCATTGACCATGGAGATTTGGATATTCCTTGGAGTGAACTTGT
TTTAAAAGAAAAAATTGGAGCAGGTTCTTTTGGAACTGTCCATCGTGCTG
AATTGCGTGGTTGTGAAGTTGCTGTCAAAATTCTCTTGGAACAAGGTTTC
CATGCAGAACGCTTCAGGGAATTTTTAAGGGAGGTTGCCATCATGAAACG
TTTACGGCACCCTAACATTGTTCTTTTTATGGGTGCTGTTACTCAACCGC
CAAAGTTGTCCATTGTTACCGAATACTTGTCAAGAGGCAGTCTATTTAGA
CTTTTGCAGATGCCTGATGCTGCATTGGTATTAGATGAGAGGTGTCGCTT
GAATATGGCATTAGATGTGGCAAGGGGAATGAATTATCTTCATCAACTTA
AACCTCCCATTGTTCATCGGGACTTAAAGTCCCCAAATCTTTTGGTAGAC
AGTACTTATACAGTTAAGGTCTGCGATTTTGGTCTTTCACGTTCAAAGGC
AAACACATTTCTTTCGTCAAAAACAGCTGCTGGAACTCCGGAATGGATGG
CACCCGAAGTTCTCTGCGATGAGCCATCGAATGAGAAATCTGATGTTTAC
AGCTTTGGAGTAGTTCTATGGGAACTTGTGACCTTGCAACAACCATGGAA
GAATTTAAATCCACCACAGGTTGTAGCAGCTGTAGGTTTTAAAGGTAAAA
GGCTGGAGATCCCAAGCAATGTAAACCCAGTTGTGGCTTCCTTGATTGAA
CTTTGTTGGGCTAACGATACTTCCAAACGCCCTTCATTCTCCTATGTCAT
GGAATGTTTGTACCAAGTGATCATAAATACTGCATCTCAAAAATTTCATC
GACAAATTTCATGA
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protein sequence of Tc10v2_p008620.5

>Tc10v2_p008620.5 ID=Tc10v2_p008620.5|Name=Tc10v2_p008620.5|organism=Theobroma cacao|type=polypeptide|length=638bp
MDPYAWTISADQGEIGQMPSFDSLKAIDPHDDLSIKVVLIDKLRDPRLRE
LQNCVLKISSSWVSTKDVIDQLARLVCNQMGDAASSEEGVYRQWKECTKV
LKDCLGSIVFPIGSLSFGLCVHRALLFKVLADLVNLPCRITKGCKYCQRE
DASSCLVQLGVDREYLVDMFAEPGALSRPDSSLNGTSSILVSSPLCHPRF
KQVETATSIRKLSKLYFVDDQSCKHTFDDASSDNASNQDEQTGPQLSKAF
DMNYFNKNKLVSTLINNNGSTLSPLHQRTAWNIYCDKDLQMQNSSNLIPK
AIASSHLVRSPLLPSSVPSGMQNDACQALAFSDPRQCTANSVLFKQSDQP
VMSIDHGDLDIPWSELVLKEKIGAGSFGTVHRAELRGCEVAVKILLEQGF
HAERFREFLREVAIMKRLRHPNIVLFMGAVTQPPKLSIVTEYLSRGSLFR
LLQMPDAALVLDERCRLNMALDVARGMNYLHQLKPPIVHRDLKSPNLLVD
STYTVKVCDFGLSRSKANTFLSSKTAAGTPEWMAPEVLCDEPSNEKSDVY
SFGVVLWELVTLQQPWKNLNPPQVVAAVGFKGKRLEIPSNVNPVVASLIE
LCWANDTSKRPSFSYVMECLYQVIINTASQKFHRQIS*
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