Tc10v2_t007800.1

Overview
NameTc10v2_t007800.1
Unique NameTc10v2_t007800.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length1659
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
Productprobable terpene synthase 9
NoteProbable terpene synthase 9
Cross References
External references for this mRNA
DatabaseAccession
GeneID18586599
GenbankXM_007010081.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc10v2_g007800Tc10v2_g007800Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc10v2_p007800.1Tc10v2_p007800.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto501308auto501308Theobroma cacaoexon
exon-auto501309auto501309Theobroma cacaoexon
exon-auto501310auto501310Theobroma cacaoexon
exon-auto501311auto501311Theobroma cacaoexon
exon-auto501312auto501312Theobroma cacaoexon
exon-auto501313auto501313Theobroma cacaoexon
exon-auto501314auto501314Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto501315auto501315Theobroma cacaoCDS
CDS-auto501316auto501316Theobroma cacaoCDS
CDS-auto501317auto501317Theobroma cacaoCDS
CDS-auto501318auto501318Theobroma cacaoCDS
CDS-auto501319auto501319Theobroma cacaoCDS
CDS-auto501320auto501320Theobroma cacaoCDS
CDS-auto501321auto501321Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc10v2_t007800.1 ID=Tc10v2_t007800.1|Name=Tc10v2_t007800.1|organism=Theobroma cacao|type=mRNA|length=1659bp
ATGGCCCCAGCATCCCAACCCTTGTCTCACCCAAAACCCATTTCTCTGCA
AGAAGAGCAACGTCGATCAGCCAATTATCATCCCAGTATTTGGGACCCCA
GTGTGATCAAGTCCTTTACCACTCCATACACATATGAATTCCACGGTACC
AAGTTGGAAGAGCTGAAACAAGAAGCTGATAAGTTGTTTGCCTCAACCAA
AGACACTGCTGCCTTGTTAAAGTTAATTGACTCATTGCGGAGGCTTGGTG
TGGCCTACCATTTTCAGAAACAGATTGCAGAGGCTTTGACTCAATTGCAT
GTTGATCGAAATGTCTCCATTAATGACCTTTCCACAGCTGCTTTGTATTT
TCGCCTTCTTCGAGAGCATGGTTATCGAGTTAGTGCAGATATATTCGAGA
AATTTAAAGGTGGAGACGGGAAGTTCATGGACAGCTTAAGTGGAGATGTT
GAGGGGCTTTTGTGCTTGGATGAAGCTTCATTCTTGGGAGTGCAAGGGGA
AAAAATTCTTGAACAGGCAAAGGGTTTTGCCAGTGAAAGTCTCAAGACTT
TAATAGGGAAACTGGACAAAAATAAGGCTAAGCATGTTCAACAGTCGCTG
GAGGTTCCGCTTTACTGGAGGATGGAAAGGATTGAAGCACGAAACTTCAT
TGACTCCTACCAGATGGATGATACAAAGAGCTCAGTTTTGCCGGAGCTGG
CTAAGTTAGACTACAATCTTATTCAATCAGCTTACCAGCAAGAACTGAAA
GAACTAGCAGAGTGGTGGAGGGAATTGAACTTCAAGGAGAAGCTTAGTTT
CAGCCGAGACCGATTGATGGAAATATATTTCTGGGCTACAGGGTTAAGCT
TTGAGCCCCAATATTCCAAATGCAGGATATGCTTCACTAAATACGCATGC
TTGGCAACAGTAGTTGATGACATATATGACATATACGGATCAGTCGATGA
ACTTGAGAGTTTCACAAAAGCAGTGACTGGGTGGGATGTCAAGGCCGTTG
AAGAACTTCCAGAGTACATGAGAGTAATGTTCTCAGCCATATCTGAATTT
ACTAATGAATTGGCCAGAGAGACCTCGAAAGATCATGGGCTGGATGTTCT
GCCCTACATCCAGGAGCAGTGGGCTATACTTTGCAGAGCACATATCACAG
AAGCCAGATGGTTTTATGGTGGTCACACTCCAACTTTTGATGAATATATA
CAAAATGGATGGATATCAATAGGCAGTCTAGGAGGGCTGGTTCTTCTTTG
TTTTGTAGAAGCAGACTCCATAGTTGAACAATTCCCGCATTGTCTCAAAG
ACTACTCTCAGTTATTTTACTGGTCATCTCTCATCACCCGACTCAGCGAT
GATCTGGGTACCTCCAAGGCTGAGATGGAGAGAGGGGATATACCAAAAGC
TGTGCAGAGTTACGTGATCGAAAAAGGTGTATCTGAAGAAGAAGCAAGAG
ATCACGTAAAGAACCTGATAAGCGATTCATGGAAGAAGATCAATGAGGAA
ATTGTTGACAATACTTTCCCTGAAGTTATAGTAAACTTATCAAAGAACAT
GGCTCGAACAGCTCAGTGCATGTACCAGCATGGAGATGGAGTCGGTACTT
CCACCGGAGTGACTAAAGATTGTATTGTTTCATCCATCCTTAAGCCCATC
TCAATTTAA
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protein sequence of Tc10v2_p007800.1

>Tc10v2_p007800.1 ID=Tc10v2_p007800.1|Name=Tc10v2_p007800.1|organism=Theobroma cacao|type=polypeptide|length=553bp
MAPASQPLSHPKPISLQEEQRRSANYHPSIWDPSVIKSFTTPYTYEFHGT
KLEELKQEADKLFASTKDTAALLKLIDSLRRLGVAYHFQKQIAEALTQLH
VDRNVSINDLSTAALYFRLLREHGYRVSADIFEKFKGGDGKFMDSLSGDV
EGLLCLDEASFLGVQGEKILEQAKGFASESLKTLIGKLDKNKAKHVQQSL
EVPLYWRMERIEARNFIDSYQMDDTKSSVLPELAKLDYNLIQSAYQQELK
ELAEWWRELNFKEKLSFSRDRLMEIYFWATGLSFEPQYSKCRICFTKYAC
LATVVDDIYDIYGSVDELESFTKAVTGWDVKAVEELPEYMRVMFSAISEF
TNELARETSKDHGLDVLPYIQEQWAILCRAHITEARWFYGGHTPTFDEYI
QNGWISIGSLGGLVLLCFVEADSIVEQFPHCLKDYSQLFYWSSLITRLSD
DLGTSKAEMERGDIPKAVQSYVIEKGVSEEEARDHVKNLISDSWKKINEE
IVDNTFPEVIVNLSKNMARTAQCMYQHGDGVGTSTGVTKDCIVSSILKPI
SI*
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