Tc10v2_t007790.2

Overview
NameTc10v2_t007790.2
Unique NameTc10v2_t007790.2
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length1923
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
Productdihydrolipoyllysine-residue acetyltransferase component 1 of pyruvate dehydrogenase complex, mitochondrial, transcript variant X2
NoteDihydrolipoyllysine-residue acetyltransferase component 1 of pyruvate dehydrogenase complex, mitochondrial
Cross References
External references for this mRNA
DatabaseAccession
GeneID18586597
GenbankXM_018129560.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc10v2_g007790Tc10v2_g007790Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc10v2_p007790.2Tc10v2_p007790.2Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto501215auto501215Theobroma cacaoexon
exon-auto501216auto501216Theobroma cacaoexon
exon-auto501217auto501217Theobroma cacaoexon
exon-auto501218auto501218Theobroma cacaoexon
exon-auto501219auto501219Theobroma cacaoexon
exon-auto501220auto501220Theobroma cacaoexon
exon-auto501221auto501221Theobroma cacaoexon
exon-auto501222auto501222Theobroma cacaoexon
exon-auto501223auto501223Theobroma cacaoexon
exon-auto501224auto501224Theobroma cacaoexon
exon-auto501225auto501225Theobroma cacaoexon
exon-auto501226auto501226Theobroma cacaoexon
exon-auto501227auto501227Theobroma cacaoexon
exon-auto501228auto501228Theobroma cacaoexon
exon-auto501229auto501229Theobroma cacaoexon
exon-auto501230auto501230Theobroma cacaoexon
exon-auto501231auto501231Theobroma cacaoexon
exon-auto501232auto501232Theobroma cacaoexon
exon-auto501233auto501233Theobroma cacaoexon
exon-auto501234auto501234Theobroma cacaoexon
exon-auto501235auto501235Theobroma cacaoexon
exon-auto501236auto501236Theobroma cacaoexon
exon-auto501237auto501237Theobroma cacaoexon
exon-auto501238auto501238Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto501239auto501239Theobroma cacaoCDS
CDS-auto501240auto501240Theobroma cacaoCDS
CDS-auto501241auto501241Theobroma cacaoCDS
CDS-auto501242auto501242Theobroma cacaoCDS
CDS-auto501243auto501243Theobroma cacaoCDS
CDS-auto501244auto501244Theobroma cacaoCDS
CDS-auto501245auto501245Theobroma cacaoCDS
CDS-auto501246auto501246Theobroma cacaoCDS
CDS-auto501247auto501247Theobroma cacaoCDS
CDS-auto501248auto501248Theobroma cacaoCDS
CDS-auto501249auto501249Theobroma cacaoCDS
CDS-auto501250auto501250Theobroma cacaoCDS
CDS-auto501251auto501251Theobroma cacaoCDS
CDS-auto501252auto501252Theobroma cacaoCDS
CDS-auto501253auto501253Theobroma cacaoCDS
CDS-auto501254auto501254Theobroma cacaoCDS
CDS-auto501255auto501255Theobroma cacaoCDS
CDS-auto501256auto501256Theobroma cacaoCDS
CDS-auto501257auto501257Theobroma cacaoCDS
CDS-auto501258auto501258Theobroma cacaoCDS
CDS-auto501259auto501259Theobroma cacaoCDS
CDS-auto501260auto501260Theobroma cacaoCDS
CDS-auto501261auto501261Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc10v2_t007790.2 ID=Tc10v2_t007790.2|Name=Tc10v2_t007790.2|organism=Theobroma cacao|type=mRNA|length=1923bp
ATGGCGCTTTCACGGCTTAGAAACCCAGTAATCTCAAGAGCCGCCCCATC
TCTCTTCAAAGCTCGGTTTCTCTCTTCCTACGCCTCACCCAGATCACTTT
CTCGCACTTTAAATGTGGAAAGCCCTTTCAAGGACTTTAATGGCTCTCTA
TTAAGGCCCAATTCTTTATCCACCATTATTGGGGTTTGCAGTACTTCATC
AATTCTCAAGTTGCAGATTGGAGTTCGGCATTTCTCATCTGCAGACCTTC
CTGAGCATACAGTCCTGGGGATGCCTGCTTTGTCTCCAACAATGAGCCAA
GGAAACATTGCAAAATGGAAGAAGAAAGAAGGAGATAAGATTGAAGTGGG
TGATGTACTCTGTGAAATAGAGACAGATAAAGCCACACTTGAGTTTGAAA
GTCTTGAAGAAGGGTTTTTGGCCAAGATACTAGTACCTGAAGGGTCAAAG
GATGTGCCTGTGGGACAACCTATTGCAATAACGGTTGAGGATGCAGATAA
TATCCAGAAGATCCCTTCTAGTCTTGGGAGTGGATCAGATGTTGAGGAAA
AAACAGCCCATCAGGATGTGAGAAACTCCGGAAAAGACGAGGAACAAAGT
TCTGTTAACATCAATGCATTAGACCTCCCTCCTCACATTGTAATTGGAAT
GCCAGCACTCTCTCCAACAATGAACCAGGGTAACATCTTTAAGTGGAGGA
AAAAAGAAGGGGACAAGATAGAAGTGGGCGATGTGATATGTGAGATTGAG
ACTGACAAAGCTACCCTCGAATTTGAGAGCCTTGAAGAGGGTTACCTGGC
AAAGATACTGGCTCCTGAAGGTTCAAAGGATGTGGCTGTGGGAGAACCAA
TTGCAGTAACAGTTGAAAATCCAGATGATATTGAAGCTGTAAAGACTTCT
GTTGGTGGTGGTTCAGGGGTTAAAATGCAAAAACCTACCCATCATGAATC
TAAAAGTGAAGTTAGAGAGCAGAAGTTTGGTTTTACAAAGATCAGTCCAT
CAGCCAAGTTGCTTATTTCAGAATATGGATTAGATGCATCATCAATAAAG
GCATCAGGTCCTCATGGTACTTTGTTGAAAGGGGATGTTTTGGCTGCAAT
TAAGTCTGGAAAAGGATCTTCTAAAATTTCTTCATCTGAGAAGATAAAAA
CATCACCTGAAGCCAGCCCTCAAAAATCTACTTCAGCAAGGCTAGAGTCA
AAGACTCAGCCACAGCAATCAGATTCTTTTGAAGACTTGCCCAATACTCA
AATTCGCAAGATTATTGCGAAGAGGTTATTGGAATCAAAACAGAATACAC
CACATTTATATCTATCTTCAGATGTTATACTGGATCCTCTTCTTTGTTTT
AGGAAGGAGCTTAAAGAGAAGCATGATATAAAAGTTTCAGTGAATGACAT
TGTCATTAAAGCGGTGGCAATTGCTCTGAAAAATGTACCTGAAGCTAATG
CTTATTGGGATGTTGAGAAAGGGGAAATAATTTTGTGTGATTCTGTTGAC
ATATCAATTGCAGTTGCTACTGAGAAGGGTTTAATGACTCCAATCGTAAG
GAATGCAGATCAGAAATCCATTTCATCAATCTCCTCAGAGGTCAAGCAAC
TAGCTGAAAAGGCAAGGGCTGGAAAGCTTTTACCAAACGAATTTCAAGGA
GGAACCTTTAGCATTTCAAATCTGGGAATGTTTCCTGTCGACCATTTTTG
TGCAATTATAAATCCCCCACAGGCTGGTATCCTTGCTGTTGGTAGAGGAA
ACAAATTTGTTGAACCGGTCGTTGGAAGTGATGGGATTGAGAGGCCTGCA
GTTGTGACAAAAATGAACTTGACATTATCTGCTGACCATCGTGTGTTTGA
CGGCGAAGTTGGAGGTGCATTTCTTTCAGCATTACAATCTAACTTCAGTG
ATATTCGGAGGCTTCTTCTCTGA
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protein sequence of Tc10v2_p007790.2

>Tc10v2_p007790.2 ID=Tc10v2_p007790.2|Name=Tc10v2_p007790.2|organism=Theobroma cacao|type=polypeptide|length=641bp
MALSRLRNPVISRAAPSLFKARFLSSYASPRSLSRTLNVESPFKDFNGSL
LRPNSLSTIIGVCSTSSILKLQIGVRHFSSADLPEHTVLGMPALSPTMSQ
GNIAKWKKKEGDKIEVGDVLCEIETDKATLEFESLEEGFLAKILVPEGSK
DVPVGQPIAITVEDADNIQKIPSSLGSGSDVEEKTAHQDVRNSGKDEEQS
SVNINALDLPPHIVIGMPALSPTMNQGNIFKWRKKEGDKIEVGDVICEIE
TDKATLEFESLEEGYLAKILAPEGSKDVAVGEPIAVTVENPDDIEAVKTS
VGGGSGVKMQKPTHHESKSEVREQKFGFTKISPSAKLLISEYGLDASSIK
ASGPHGTLLKGDVLAAIKSGKGSSKISSSEKIKTSPEASPQKSTSARLES
KTQPQQSDSFEDLPNTQIRKIIAKRLLESKQNTPHLYLSSDVILDPLLCF
RKELKEKHDIKVSVNDIVIKAVAIALKNVPEANAYWDVEKGEIILCDSVD
ISIAVATEKGLMTPIVRNADQKSISSISSEVKQLAEKARAGKLLPNEFQG
GTFSISNLGMFPVDHFCAIINPPQAGILAVGRGNKFVEPVVGSDGIERPA
VVTKMNLTLSADHRVFDGEVGGAFLSALQSNFSDIRRLLL*
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