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Properties
Property Name | Value |
Model evidence | Supporting evidence includes similarity to: 6 ESTs, 135 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns |
Product | probable pectate lyase 13, transcript variant X2 |
Note | Probable pectate lyase 13 |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Tc10v2_t007140.1 ID=Tc10v2_t007140.1|Name=Tc10v2_t007140.1|organism=Theobroma cacao|type=mRNA|length=1482bp ATGCTTCCTTTAACCTGCATTCTCTTAATATGCACACTGGGTTCTGTCTC TTCCATTGCCAGAGCTGCCTTCAATCTTAGCCTCCCTCACCAGCACCCTG ACCCTGAATCCGTTGTTCAAGATGTTCAAAGGAGGTTAAACGTGTCCTTG TCAAGAAGACAAGCCCTGTCTGTAACCCAAAAAGACCAATGTCGCACTGG AAACCCCATCGACGACTGCTGGCGGTGCGACCCAAACTGGTACAACAACC GCCAACACTTAGCCGACTGCTCCATAGGCTTTGCACAAGGCACTCTAGGT GGAAAAGGTGGCCGGATCTACACCGTCACAGATTCCTCCGACAGCAACCC TGCTAACCCCAAGCCGGGCACTCTCCGTCACGCTGTCATCCAAAACGAAC CCCTATGGATCATCTTCTCAACCAACATGGTCATCAAGCTCAAACATGAG CTGATTTTCAACTCATACAAAACCGTCGATGGCCGGGGAGCCAACGTTCA TATCACCGGAAATGGGTGTATAACTTTGCAGTATGTGTCTCATGTCATCA TCCATAACATCCATGTACACCATTGTAAGCCTTCGGGGAACACTGACATT GCTTCATCTCCAACTCACGTTGGATGGAGAGGGCGGTCGGACGGTGATGG GATTTCCATATTTAGTTCTCAGAAGCTCTGGATTGATCATTGCTCCCTTA GTTACTGCACTGATGGCCTGATCGATGCTATCATGGGGTCCACCGGGATT ACCATTAGTAATAACTACTTTTCTCACCATGATGAAGTTATGCTTCTGGG CCATGATGACAGGTATTTGCCTGATTCCGGAATGCAGGTGACCATAGCTT TTAATCACTTCGGACAAGGGTTGGTGCAAAGAATGCCAAGGTGCCGGCGG GGGTATATACACGTGGTGAACAATGATTTTACTGCATGGGAAATGTATGC TATCGGTGGTAGTGCAAACCCTACCATCAATAGTCAGGGGAATCGATATA CTGCACCAGGGGACCCCAATGCTAAAGAGGTGACGAAGCGAGTGGACACA GACGAGAAAGACTGGACAGGCTGGAACTGGAGGACAGAGGGGGACTTAAT GGTAAATGGAGCATACTTTGTGCCCTCTGGAGCTGGCTTAAGCGCTCAGT ATGCAAAAGCTTCCAGTGTGGAGCCCAAGTCTGCTGCTCTCATTGAACAG CTCACTTTCAACGCTGGCGTTTTCGGTGAGGCTAGGGAAGAGACAGGGAG CTTTTCTTATCCAGGATACAGCAGCGGTGGGTCCAGCAGCACCAGCACCG GTAGTGCACGGTCCGGCGATGATGGCGACTACTTTGGAATGATATTCGGG AGCGGCTCACCACTGCCCCCAGCATCCACATCCATAGCCTCAATCTTTTT GTCTCTTCTAATTATTTTGGTTTTGTATTCTATCACCAACCAAGGTGCTC TACCATCATTATTATCATTATTATTGTTATAG back to topprotein sequence of Tc10v2_p007140.1 >Tc10v2_p007140.1 ID=Tc10v2_p007140.1|Name=Tc10v2_p007140.1|organism=Theobroma cacao|type=polypeptide|length=494bp
MLPLTCILLICTLGSVSSIARAAFNLSLPHQHPDPESVVQDVQRRLNVSL SRRQALSVTQKDQCRTGNPIDDCWRCDPNWYNNRQHLADCSIGFAQGTLG GKGGRIYTVTDSSDSNPANPKPGTLRHAVIQNEPLWIIFSTNMVIKLKHE LIFNSYKTVDGRGANVHITGNGCITLQYVSHVIIHNIHVHHCKPSGNTDI ASSPTHVGWRGRSDGDGISIFSSQKLWIDHCSLSYCTDGLIDAIMGSTGI TISNNYFSHHDEVMLLGHDDRYLPDSGMQVTIAFNHFGQGLVQRMPRCRR GYIHVVNNDFTAWEMYAIGGSANPTINSQGNRYTAPGDPNAKEVTKRVDT DEKDWTGWNWRTEGDLMVNGAYFVPSGAGLSAQYAKASSVEPKSAALIEQ LTFNAGVFGEAREETGSFSYPGYSSGGSSSTSTGSARSGDDGDYFGMIFG SGSPLPPASTSIASIFLSLLIILVLYSITNQGALPSLLSLLLL* back to top
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