Tc10v2_t005350.1

Overview
NameTc10v2_t005350.1
Unique NameTc10v2_t005350.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length1860
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 6 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
Productleukotriene A-4 hydrolase homolog
NoteLeukotriene A-4 hydrolase homolog
Cross References
External references for this mRNA
DatabaseAccession
GeneID18586312
GenbankXM_018129579.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc10v2_g005350Tc10v2_g005350Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc10v2_p005350.1Tc10v2_p005350.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto495317auto495317Theobroma cacaoexon
exon-auto495318auto495318Theobroma cacaoexon
exon-auto495319auto495319Theobroma cacaoexon
exon-auto495320auto495320Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto495321auto495321Theobroma cacaoCDS
CDS-auto495322auto495322Theobroma cacaoCDS
CDS-auto495323auto495323Theobroma cacaoCDS
CDS-auto495324auto495324Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc10v2_t005350.1 ID=Tc10v2_t005350.1|Name=Tc10v2_t005350.1|organism=Theobroma cacao|type=mRNA|length=1860bp
ATGGCACCCTTAGACCCTCACTCCTTCACCGATTCGACCCACACTTTGAC
AACCCACATCGCCCTTTCCCTCTACTTCGACTTCCCTTCCGCCACCATCC
ACGGCGCTGCTCTCTTCACTCTCTCTTCCCCTCACTCCGGCCCGCTCTGC
CTTGACACGCGCTCCCTTTCCATCCACCGAGTCCTCTCCCCTTCCACCCT
TTCCCCTCTCCCTTACTCCCTCTCGCCTTTTTGCGACCCCATCAAAGGAA
CCCACCTCTCCCTTTCACTCCCAAACGACGTCGCCCTCTCTTCTTTCCTG
ATCACTTTCTCCACTTCCCCTTCCTCCTCCGCCCTCCAGTGGCTCTCTCC
GCCGCAGACGTTCAACAAAAAACACCCTTTCGTTTACACTCAATGCCAAT
CCATCCACGCGCGCTCCGTTTTCCCTTGCCAAGACACCCCCGCAGCCCGA
ATCCGTTATTCTGCTTTACTCAATGTTCCCCGAGAATTATCCGCCGTTAT
GTCCGCTCGCCACGTCGACAGGCGGTTACCGGTTTCCGGTGAAGGGTATT
CGAATTTGTTACCCAATGGGTTTAATTCTTTATGGTGTTCTGAAACGAGG
GTAGTCGAGGAATTTGATATGAACCAGCCGATTCCGCCTTATTTATTCGC
GTTTGCAGTTGGGGAGTTAGGATTCAGGGAAGTGGGGCCGAGGACTAGGG
TTTACTCAGAGGCGGCGGATGGTGTTTTGGAGGCTGCTGCTAAGGAGTTT
GCGGGGACGGAGGATATGATAAGGCAAGGGGAGAAGCTGTTTGGGGATTA
TGAGTGGGAGAGGTTTGATTTGCTTGTTTTGCCGCCGAGTTTTCCTTATG
GTGGAATGGAGAATCCGAGGATGGTGTTTTTGACTCCAACTGTAATTAAA
GGAGATGCTAGTGGGGCTCAGGTCGTGGCCCATGAACTCGCGCATAGTTG
GACTGGGAATTTGATTACTAACAAGAACAATGAACATTTTTGGTTGAATG
AGGGATTTACAACATATGCAGAGAGGAGAATTGTTGAGGCTGTGCAGGGT
GAAGACAGAGCTGTATTGAGTATTGGGATTGGTTGGAGGGGCTTAAATGA
TGAAATCAAGAGGTTCCAGGACAACTTGGAATTCACCAAGCTCAAAACCA
ATCAGGAAGGAGTGGACCCGGACACATTTTATTCCCAAGTTCCATATGAG
AAAGGTTTTCAGTTCCTATGGTGCATTGAACGTCAGATTGGAAGACCAGC
ATTTGATGAATTTCTCAAGAAATATATTGCCACCTTCAAGTTCAAATCAA
TTGACACTGAGACATTTCTTGACTTCCTGAAAGCAAATGCCCCTGGAATA
GAAAAAGAGATTGACCTGGTCTTGTGGACTGAAGGGACAGGTATCCCACC
CGATGCATATGAACCGGTATCCAACCTTTACACCAAAATTGTGTCATTGG
CAAATGAATTCAAACTTGGGAGGATGCCGAGGGAGGATGAAGTTGCTGAT
TGGCAAGGGCAGGAATGGGAGCTCTACTTAGAGAACCTGCCTAAAGTTGT
AGAGGCTTCCCAGGTCTTTGCCTTGGATGCACGCTACAGGCTATCAGAAT
CAAATGATTATGAGGTAAAAGTGGCTTTTCTTCAACTAGCCATTTTGTCC
AAGTGCAGAGATTTCTATGGTGAGGTGGAGAAAACTTTGAAGGAAGTTGG
GAGGATGAAGTACGTTCGTCCACTTTATACTGCTCTTGTACAAGGTATTG
GAAAAGAGGAAGAGAAGATTTTGGCCAAAAGGGTGTTTGCTGAGGCTCGT
GACTGTTATCACCCCATAGCTCAAGGAGTTGTTGAGTCAATCTTTGCCAA
GCACCTCTAG
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protein sequence of Tc10v2_p005350.1

>Tc10v2_p005350.1 ID=Tc10v2_p005350.1|Name=Tc10v2_p005350.1|organism=Theobroma cacao|type=polypeptide|length=620bp
MAPLDPHSFTDSTHTLTTHIALSLYFDFPSATIHGAALFTLSSPHSGPLC
LDTRSLSIHRVLSPSTLSPLPYSLSPFCDPIKGTHLSLSLPNDVALSSFL
ITFSTSPSSSALQWLSPPQTFNKKHPFVYTQCQSIHARSVFPCQDTPAAR
IRYSALLNVPRELSAVMSARHVDRRLPVSGEGYSNLLPNGFNSLWCSETR
VVEEFDMNQPIPPYLFAFAVGELGFREVGPRTRVYSEAADGVLEAAAKEF
AGTEDMIRQGEKLFGDYEWERFDLLVLPPSFPYGGMENPRMVFLTPTVIK
GDASGAQVVAHELAHSWTGNLITNKNNEHFWLNEGFTTYAERRIVEAVQG
EDRAVLSIGIGWRGLNDEIKRFQDNLEFTKLKTNQEGVDPDTFYSQVPYE
KGFQFLWCIERQIGRPAFDEFLKKYIATFKFKSIDTETFLDFLKANAPGI
EKEIDLVLWTEGTGIPPDAYEPVSNLYTKIVSLANEFKLGRMPREDEVAD
WQGQEWELYLENLPKVVEASQVFALDARYRLSESNDYEVKVAFLQLAILS
KCRDFYGEVEKTLKEVGRMKYVRPLYTALVQGIGKEEEKILAKRVFAEAR
DCYHPIAQGVVESIFAKHL*
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