Tc10v2_t004990.1

Overview
NameTc10v2_t004990.1
Unique NameTc10v2_t004990.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length696
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 31 ESTs, 24 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
Productchalcone--flavonone isomerase
NoteChalcone--flavonone isomerase
Cross References
External references for this mRNA
DatabaseAccession
GeneID18586269
GenbankXM_018129717.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc10v2_g004990Tc10v2_g004990Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc10v2_p004990.1Tc10v2_p004990.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto494495auto494495Theobroma cacaoexon
exon-auto494496auto494496Theobroma cacaoexon
exon-auto494497auto494497Theobroma cacaoexon
exon-auto494498auto494498Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto494499auto494499Theobroma cacaoCDS
CDS-auto494500auto494500Theobroma cacaoCDS
CDS-auto494501auto494501Theobroma cacaoCDS
CDS-auto494502auto494502Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc10v2_t004990.1 ID=Tc10v2_t004990.1|Name=Tc10v2_t004990.1|organism=Theobroma cacao|type=mRNA|length=696bp
ATGTCTACGTCACCGTGCGTCGCCGGAATCCAGGTGGAGAACGTTACTTT
CCCTCCAAATGTCAAGCCCCCGGGTTCCACCAAAACTCTGTTCCTTGGTG
GCGCAGGGGAGAGAGGATTGGAAATCCAAGGAAAGTTCGTTAAATTCACA
GCGATCGGAGTTTACTTGGAAGAAATCGCCGTGGAGTCCCTCGCAGTTAA
GTGGAAGGGTAAGAGTGCCGAGGTGTTAACGGAATCCGTTGAGTTTTTCA
GGGACATCGTTACAGGTGCCTTTGAGAAGTTCATACGGGTGACAACAATC
CTGCCATTAACGGGTCAGCAATACTCTGAAAAAGTGTCAGAGAATTGTGT
TGCCATTTGGAAATCTCTTGGACTTTACACTGACGCAGAAGCAAAAGCCA
TTGAAAAGTTCCTTGAGGTGTTCAAGGATGAAAACTTCCCACCTGGCTCC
TCCATTCTTTTCGCACTGTCAGCCCATGGTTCATTAACAATCAGCTTTTC
CAAGGATAGTTCTGTGCCAGAAGTTGGGACAGCAGTGATAGAGAATAAAC
TACTTGCAAATGCAGTGCTGGAGTCTATCGTTGGCAAGGATGGTGTTTCT
CCTGTAGCAAGGAAAAGCATGGCATCAAGATTATCAGCATTGTTCGATGA
CACTGTTGAGAAGGCGGCCCAGAATGGGAAACCGGAGTGTCAGTAG
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protein sequence of Tc10v2_p004990.1

>Tc10v2_p004990.1 ID=Tc10v2_p004990.1|Name=Tc10v2_p004990.1|organism=Theobroma cacao|type=polypeptide|length=232bp
MSTSPCVAGIQVENVTFPPNVKPPGSTKTLFLGGAGERGLEIQGKFVKFT
AIGVYLEEIAVESLAVKWKGKSAEVLTESVEFFRDIVTGAFEKFIRVTTI
LPLTGQQYSEKVSENCVAIWKSLGLYTDAEAKAIEKFLEVFKDENFPPGS
SILFALSAHGSLTISFSKDSSVPEVGTAVIENKLLANAVLESIVGKDGVS
PVARKSMASRLSALFDDTVEKAAQNGKPECQ*
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