Tc10v2_t002740.1

Overview
NameTc10v2_t002740.1
Unique NameTc10v2_t002740.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length963
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 11 ESTs, 62 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
Productserine/threonine-protein phosphatase PP1 isozyme 4
NoteSerine/threonine-protein phosphatase PP1 isozyme 4
Cross References
External references for this mRNA
DatabaseAccession
GeneID18586006
GenbankXM_007009120.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc10v2_g002740Tc10v2_g002740Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc10v2_p002740.1Tc10v2_p002740.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto491059auto491059Theobroma cacaoexon
exon-auto491060auto491060Theobroma cacaoexon
exon-auto491061auto491061Theobroma cacaoexon
exon-auto491062auto491062Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto491063auto491063Theobroma cacaoCDS
CDS-auto491064auto491064Theobroma cacaoCDS
CDS-auto491065auto491065Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc10v2_t002740.1 ID=Tc10v2_t002740.1|Name=Tc10v2_t002740.1|organism=Theobroma cacao|type=mRNA|length=963bp
ATGGCGGCGGCGACGACGGCACAAGGGCAAACGGCGATGATGGACCCCAC
GGTACTAGATGATATAATCAGACGGTTGACAGAAGTCCGATCAGCCAGGC
CAGGGAAACAAGTGCAACTATCTGAAACTGAGATCAAGCAGCTTTGTGTT
GCTTCCAGAGATATCTTCCTTCAACAGCCCAATTTGCTTGAACTTGAAGC
ACCCATCAAAATTTGCGGTGACATACATGGACAGTATAGTGATTTATTGA
GGCTCTTCGAGTATGGGGGTTTTCCTCCCAATGCCAATTATCTATTTCTA
GGTGACTATGTGGATCGTGGCAAGCAGAGTTTGGAAACAATATGTCTTCT
ACTTGCTTATAAGATTAAATATCCAGAGAACTTTTTCCTATTGCGAGGAA
ACCACGAGTGTGCATCTATTAATCGGATATATGGATTTTATGACGAATGC
AAACGAAGGTTTAATGTGAGACTTTGGAAAAGCTTTACTGATTGTTTTAA
CTGCCTTCCTGTTGCGGCTCTTATAGATGACAAAATATTGTGTATGCATG
GTGGTCTTTCCCCTGACTTGACAAACTTGGATCAAATTAGAAACTTATCT
CGTCCAACTGCTGTTCCTGACACTGGTTTGCTGTGTGATTTGCTCTGGTC
TGACCCTGGTAGAGATGTTAAAGGATGGGGAATGAATGACAGAGGAGTTT
CATTCACCTTTGGTGCAGACAAAGTGTCAGAATTCTTAACGAAGCATGAT
TTAGATCTTGTCTGCCGTGCGCATCAGGTTGTGGAGGATGGTTACGAATT
CTTTGCTGATAGGCAACTTGTTACAATATTTTCAGCACCTAACTATTGTG
GTGAATTTGATAATGCCGGTGCAATGATGAGCGTCGATGAAAACCTGATG
TGTTCTTTCCAGATTCTCAAGCCAGCGGAGAAAAAAGCTAAGTTCATGTC
CACTAAAATGTGA
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protein sequence of Tc10v2_p002740.1

>Tc10v2_p002740.1 ID=Tc10v2_p002740.1|Name=Tc10v2_p002740.1|organism=Theobroma cacao|type=polypeptide|length=321bp
MAAATTAQGQTAMMDPTVLDDIIRRLTEVRSARPGKQVQLSETEIKQLCV
ASRDIFLQQPNLLELEAPIKICGDIHGQYSDLLRLFEYGGFPPNANYLFL
GDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDEC
KRRFNVRLWKSFTDCFNCLPVAALIDDKILCMHGGLSPDLTNLDQIRNLS
RPTAVPDTGLLCDLLWSDPGRDVKGWGMNDRGVSFTFGADKVSEFLTKHD
LDLVCRAHQVVEDGYEFFADRQLVTIFSAPNYCGEFDNAGAMMSVDENLM
CSFQILKPAEKKAKFMSTKM*
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