Tc10v2_t001930.1

Overview
NameTc10v2_t001930.1
Unique NameTc10v2_t001930.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length1743
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
Productanthranilate synthase alpha subunit 1, chloroplastic
NoteAnthranilate synthase alpha subunit 1, chloroplastic
Cross References
External references for this mRNA
DatabaseAccession
GeneID18585910
GenbankXM_018128631.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc10v2_g001930Tc10v2_g001930Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc10v2_p001930.1Tc10v2_p001930.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto489851auto489851Theobroma cacaoexon
exon-auto489852auto489852Theobroma cacaoexon
exon-auto489853auto489853Theobroma cacaoexon
exon-auto489854auto489854Theobroma cacaoexon
exon-auto489855auto489855Theobroma cacaoexon
exon-auto489856auto489856Theobroma cacaoexon
exon-auto489857auto489857Theobroma cacaoexon
exon-auto489858auto489858Theobroma cacaoexon
exon-auto489859auto489859Theobroma cacaoexon
exon-auto489860auto489860Theobroma cacaoexon
exon-auto489861auto489861Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto489862auto489862Theobroma cacaoCDS
CDS-auto489863auto489863Theobroma cacaoCDS
CDS-auto489864auto489864Theobroma cacaoCDS
CDS-auto489865auto489865Theobroma cacaoCDS
CDS-auto489866auto489866Theobroma cacaoCDS
CDS-auto489867auto489867Theobroma cacaoCDS
CDS-auto489868auto489868Theobroma cacaoCDS
CDS-auto489869auto489869Theobroma cacaoCDS
CDS-auto489870auto489870Theobroma cacaoCDS
CDS-auto489871auto489871Theobroma cacaoCDS
CDS-auto489872auto489872Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc10v2_t001930.1 ID=Tc10v2_t001930.1|Name=Tc10v2_t001930.1|organism=Theobroma cacao|type=mRNA|length=1743bp
ATGGCAATGCAGAGTAGCCTCGCATTCTCCCACCGACTGGTTCCTTCGAG
AAACCGGCTTTCTCAGGTTCCGGTTATCCGCATGCCTCCGGCTCCAACTT
GTTTTCGTACTTCAGTGAAATGCAGGAGCTCTCTGTCAAGCTCATCTCTT
GTTGCTGATGAAACGAAGTTTGCTGAGGCAGCGAAGAAGGGAAATTTGGT
GCCCCTTTACCGTTGCATTTTCTCTGATCAGCTTACTCCGGTGCTTGCAT
ACCGGTGTTTGGTTAAAGAAGATGATAGGGATGCTCCAAGTTTTCTTTTT
GAGTCAGTGGAGCCTGGTTCTCGGGTTACAAGTGTTGGCCGTTATAGTGT
GGTTGGGGCTCAACCAACAATGGAAATTGTGGCGAAAGAAAACAAGGTTA
TGGTTATGGATCATGAGGAAGGATGTTTGACTGAGGACGTTGTTGAAGAT
CCGATGTTGATTCCAACGAGAATCTCGGAGAACTGGAAACCCCAACTTAT
TGATGATCTTCCTGATGCATTTTGTGGTGGATGGATTGGTTATTTCTCAT
ATGATACAGTTCGCTATGTGGAGAAGAAAAAGCTTCCATTCTCAAAGGCA
CCACAAGATGACAGAAACCTCCCAGACATACATCTAGGGCTCTACAATGA
CGTGATTGTATTTGATCATGTGGAAAAGAAAGCATATGTAATTCACTGGG
TGAGGCTTGATCGACACTCCTCTGTGGAAAAAGCTTACAGTGTTGGAGTT
GAGCACCTAGAGAAGTTGGTGTCTAGAGTGCAGAATGTTGACCCCCCAAA
GCTATCTCCAGGCTCTATTGATTTACAAACTCACCATTTTGGCCCTTCTT
TGAAGAAGTCAAATATGGAAAGTGAAGAATTTAAGGGGGCTGTCCTACAG
GCAAAAGAACATATTCTGGCAGGGGATATTTTCCAGATTGTATTAAGTCA
ACGTTTTGAACGGCGAACATTTGCTGACCCCTTTGAAATATATAGGGCTT
TGAGAGTTGTGAATCCAAGTCCATATATGGCTTACTTGCAAGCTAGAGGA
TGTATTCTAGTTGCTTCAAGTCCGGAAATTCTCACCAGGGTGAAGAAGAA
CAAGATTGTGAATAGGCCATTGGCGGGAACATCAAGGAGAGGAAAGACAC
CTGCTGAAGATGAGCTAGCAGAAAAGCAGTTGCTAAGTAATGAAAAGGAA
TGCGCAGAACACATCATGCTTGTTGATTTGGGACGCAATGATGTTGGAAA
GGTCTCCAAATATGGTTCTGTGAAGGTGGAGAAGCTGATGAATATTGAAC
GATATTCACATGTTATGCACATGAGCTCCACGGTTATTGGGGAGTTGCAT
GATCATCTCAGTAGTTGGGATGCCCTGCGCGCTGCACTTCCTGTTGGAAC
TGTTAGCGGAGCACCAAAGGTGAAGGCCATGGAGCTAATTGATGAGCTTG
AGGTGACCAGGCGAGGCCCTTACAGTGGAGGATTTGGGGGCATCTCCTTT
ACTGGTGATTTGGATATTGCTTTGGCTCTCAGGACCATGGTATTCACAAC
CGGAACCCGCTATGACACAATGTACTCCTACAAAGATGCTGGTAGGCGCC
AGGAATGGGTAGCTCATCTTCAAGCTGGCGCTGGTATAGTGGCAGACAGT
GATCCGGATGCCGAGCACCGTGAATGCCAGAGCAAGGCCGCTGGCCTTGC
TCGTTCCATTGACTTGGCAGAGTCTGCATTCGTTAACAAATGA
back to top

protein sequence of Tc10v2_p001930.1

>Tc10v2_p001930.1 ID=Tc10v2_p001930.1|Name=Tc10v2_p001930.1|organism=Theobroma cacao|type=polypeptide|length=581bp
MAMQSSLAFSHRLVPSRNRLSQVPVIRMPPAPTCFRTSVKCRSSLSSSSL
VADETKFAEAAKKGNLVPLYRCIFSDQLTPVLAYRCLVKEDDRDAPSFLF
ESVEPGSRVTSVGRYSVVGAQPTMEIVAKENKVMVMDHEEGCLTEDVVED
PMLIPTRISENWKPQLIDDLPDAFCGGWIGYFSYDTVRYVEKKKLPFSKA
PQDDRNLPDIHLGLYNDVIVFDHVEKKAYVIHWVRLDRHSSVEKAYSVGV
EHLEKLVSRVQNVDPPKLSPGSIDLQTHHFGPSLKKSNMESEEFKGAVLQ
AKEHILAGDIFQIVLSQRFERRTFADPFEIYRALRVVNPSPYMAYLQARG
CILVASSPEILTRVKKNKIVNRPLAGTSRRGKTPAEDELAEKQLLSNEKE
CAEHIMLVDLGRNDVGKVSKYGSVKVEKLMNIERYSHVMHMSSTVIGELH
DHLSSWDALRAALPVGTVSGAPKVKAMELIDELEVTRRGPYSGGFGGISF
TGDLDIALALRTMVFTTGTRYDTMYSYKDAGRRQEWVAHLQAGAGIVADS
DPDAEHRECQSKAAGLARSIDLAESAFVNK*
back to top