Tc10v2_t001250.1

Overview
NameTc10v2_t001250.1
Unique NameTc10v2_t001250.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length5472
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
Productanaphase-promoting complex subunit 1, transcript variant X2
NoteAnaphase-promoting complex subunit 1
Cross References
External references for this mRNA
DatabaseAccession
GeneID18585835
GenbankXM_018129241.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc10v2_g001250Tc10v2_g001250Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc10v2_p001250.1Tc10v2_p001250.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto488639auto488639Theobroma cacaoexon
exon-auto488640auto488640Theobroma cacaoexon
exon-auto488641auto488641Theobroma cacaoexon
exon-auto488642auto488642Theobroma cacaoexon
exon-auto488643auto488643Theobroma cacaoexon
exon-auto488644auto488644Theobroma cacaoexon
exon-auto488645auto488645Theobroma cacaoexon
exon-auto488646auto488646Theobroma cacaoexon
exon-auto488647auto488647Theobroma cacaoexon
exon-auto488648auto488648Theobroma cacaoexon
exon-auto488649auto488649Theobroma cacaoexon
exon-auto488650auto488650Theobroma cacaoexon
exon-auto488651auto488651Theobroma cacaoexon
exon-auto488652auto488652Theobroma cacaoexon
exon-auto488653auto488653Theobroma cacaoexon
exon-auto488654auto488654Theobroma cacaoexon
exon-auto488655auto488655Theobroma cacaoexon
exon-auto488656auto488656Theobroma cacaoexon
exon-auto488657auto488657Theobroma cacaoexon
exon-auto488658auto488658Theobroma cacaoexon
exon-auto488659auto488659Theobroma cacaoexon
exon-auto488660auto488660Theobroma cacaoexon
exon-auto488661auto488661Theobroma cacaoexon
exon-auto488662auto488662Theobroma cacaoexon
exon-auto488663auto488663Theobroma cacaoexon
exon-auto488664auto488664Theobroma cacaoexon
exon-auto488665auto488665Theobroma cacaoexon
exon-auto488666auto488666Theobroma cacaoexon
exon-auto488667auto488667Theobroma cacaoexon
exon-auto488668auto488668Theobroma cacaoexon
exon-auto488669auto488669Theobroma cacaoexon
exon-auto488670auto488670Theobroma cacaoexon
exon-auto488671auto488671Theobroma cacaoexon
exon-auto488672auto488672Theobroma cacaoexon
exon-auto488673auto488673Theobroma cacaoexon
exon-auto488674auto488674Theobroma cacaoexon
exon-auto488675auto488675Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto488676auto488676Theobroma cacaoCDS
CDS-auto488677auto488677Theobroma cacaoCDS
CDS-auto488678auto488678Theobroma cacaoCDS
CDS-auto488679auto488679Theobroma cacaoCDS
CDS-auto488680auto488680Theobroma cacaoCDS
CDS-auto488681auto488681Theobroma cacaoCDS
CDS-auto488682auto488682Theobroma cacaoCDS
CDS-auto488683auto488683Theobroma cacaoCDS
CDS-auto488684auto488684Theobroma cacaoCDS
CDS-auto488685auto488685Theobroma cacaoCDS
CDS-auto488686auto488686Theobroma cacaoCDS
CDS-auto488687auto488687Theobroma cacaoCDS
CDS-auto488688auto488688Theobroma cacaoCDS
CDS-auto488689auto488689Theobroma cacaoCDS
CDS-auto488690auto488690Theobroma cacaoCDS
CDS-auto488691auto488691Theobroma cacaoCDS
CDS-auto488692auto488692Theobroma cacaoCDS
CDS-auto488693auto488693Theobroma cacaoCDS
CDS-auto488694auto488694Theobroma cacaoCDS
CDS-auto488695auto488695Theobroma cacaoCDS
CDS-auto488696auto488696Theobroma cacaoCDS
CDS-auto488697auto488697Theobroma cacaoCDS
CDS-auto488698auto488698Theobroma cacaoCDS
CDS-auto488699auto488699Theobroma cacaoCDS
CDS-auto488700auto488700Theobroma cacaoCDS
CDS-auto488701auto488701Theobroma cacaoCDS
CDS-auto488702auto488702Theobroma cacaoCDS
CDS-auto488703auto488703Theobroma cacaoCDS
CDS-auto488704auto488704Theobroma cacaoCDS
CDS-auto488705auto488705Theobroma cacaoCDS
CDS-auto488706auto488706Theobroma cacaoCDS
CDS-auto488707auto488707Theobroma cacaoCDS
CDS-auto488708auto488708Theobroma cacaoCDS
CDS-auto488709auto488709Theobroma cacaoCDS
CDS-auto488710auto488710Theobroma cacaoCDS
CDS-auto488711auto488711Theobroma cacaoCDS
CDS-auto488712auto488712Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc10v2_t001250.1 ID=Tc10v2_t001250.1|Name=Tc10v2_t001250.1|organism=Theobroma cacao|type=mRNA|length=5472bp
ATGCCCGTTGGCGTTCGCCAACTCACCGTACTCGGCGAGTTCAAGCCGTT
TGGATTAATCGCCGAGGCACTCGATGGAAAACCGCCGGATAATTCGGCCG
ATAATTACGATTATCTCCTCTTCGATCCAGAAATCGCGAGGCAACGAGAC
GAGAACTTGGACAATGACGCCTCGGCTTCAGCTCTCAGTGACCGCCGCGA
TCACGAGCTTTTCATTCGAGGCAACCGTATAATTTGGAGCGTTGGTTCAA
GAGTGTTTAAGAGATTTACCTTACCTTCTCCAGTCATCAAGGCATGCTGG
TGCCGTATGGGTGACATGTCGGAAGCTCTTCTTTGTGTCTTACAGATTGA
TTCTTTAACAATTTACAATATATCAGGTGAAGTAGTATCCATTCCGCTTC
CTTATTCCATCATATCCATATGGTCTCTTCCATTTGGCCTGTTACTCCAG
CAGGTGGCAGATGGAAATTCATTAACACATGGCCCTTTTAAATTTTCAAG
CCCTTCATTAGGTTCACGTGATATAATTCGTAATAGAAGAGAAAGTGGGT
ACAGCCCACAACATAGTTTTAGTTTTCTGACTGCATATGATCATCTTATT
AAGGGAGAATCAAGCTCAATGTCCTCACATCTGATTCTGAAGGATCTACT
GGAAGAACCACAGTCAATTTACATTGAAGAAAGAGGAAAACTGAACATAA
TGAGGGATTTTGATGAAAGAACGATTTGGACTAGTGATCTAATCCCTCTA
ATGGCATCGTATAACAAAGTAAAAATGCAGCATTCAGTTTGGGTCGCTGA
AGTAATTAATTCTAGCCTTGAAGTAGAAAATGCTAGCGTGTCTGCTATAG
TTCCTACTGGTGTATTACCGAAGCGCTTCTGCTTCCGTAGAATATGGCAG
GGGAAGGGTGCTCACACAGCTGCTTCTAAGGTTTTTCTTGCAACTGATGA
TGATGCAGCTCCCGTAATTTGTTTTCTTCTCCTAGAGCAAAAAAAATTAC
TGTCTTTAAGGCTTCAGACTGTTGAAATAAATAATGAGATTCTATTTGAT
GTTAAACCTGATATGAGCTGGAGCATACCTGCAATTGCTGCTGCTCCTGT
CATTGTGACACGACCCGGTGTGAAGGTGGGACCACTTCCGTATACAGACA
TCATTGTTCTGGCACCAGAAAACATATTACTCCTTTATTCAGGGAAGCTA
TGCCTCTGCAGGTATCTGCTGCCTACATGTTTGGGCAGAGGCAATCTCTC
CCATAATATAGGATTCTCAGGAGCAGCATCCGTTCCCCCCCATGACTTGA
AGATCGTAGGACTGGCTGATGCTGTTGAGGCACATATCAATGTGAAAGTA
AACAATCGGCAGATGTTTCGATGTGCACTACGAAGGAGCCCTTCATCATC
GTTGGCAAATGATTGCATCACAGCAATGGCTGAGGGTCTGAGTCCGAGTT
TCTATAACCATTTTCTTGTTCTTCTTTGGGGAGATGGTGATTCTGGCTAC
TTGTCAGAGGCTAATTCTACTGTTGGTTCAGAATGGAATGCTTTTTGTGA
CATTATAATGCAAATGTGCAAGAAGTCATCTGTAGTTTCTCAAGAGATTC
CAAAGTCATCTTGGGAGTTTCTTCTTAATAGCAAATTTCACGAGAACTAC
CTCAAGATTAACTCCATCATTGGATTGTCTTCTAGAATAGCACTTGATAG
GCCAGGATTGGATTCCATAAGATCAAATATAGATGGTTCAAAAAATTCAG
AAAAATCATTTTACTTTGATCTATTAATGGAGAGTTTGGATTCTCTGCAT
GCAGTTTATGAAAGTCTGAAAATGGATAATCTCCGGAGAAGGGATTTGGA
GCTTCTGGCAATTCTGTTGTGTAATATTGCTAAATTCTTGGGTGAAGAAT
GCTATTTGGATCATTATGTCCGTGATTTTCCTGCACTTTCCAAGACAGTC
AGAATGGGCACAAATTCTTTGTCCAGGAAAACTCCTTTCAGTTTATTCAG
ATGGCTGGAAAATTGTTTGCAACATGGATGTACTCCTGCTAATTCTAACT
ATCTTCCACTTGTAATTTGTAAAGACGGAAGTTCTGTGGTGAGCTGGGCA
CGAAAGATTGTCTCTTTTTACAGTTTATTATGTGGTGCTAAACTCATAGG
AAAGAAGCTTTCGTCTGGTGTTAGCTGCAACATTGCCTCTGGATCATTTT
GCTCTAATGAGGAGCTCACAGTGTTGGCAATGGTTGGGGAGAAATTTGGA
TTGAAAGAGTTGGATTCTTTGCCCTCTGGTGTATCTCTTCCTCTTCGACA
TGCTTTGGACAAATGTCGGGAATCTCCTCCTGCTGGCTGGCCTGCAGCTG
CATATGTTCTTCTTGGTCGAGAGGACTTGGCCTTGTCTTGTTTGGCACAT
TCATGCAAATTTAAGGAACTTGAAACGCAAACAAATGTGAATTTGGTCCC
TATGTCTACACCTTACATGCTACATTTGCATCCCGTGACCATTCCTTCAA
CTGTATCGGATACCATTATACCGGAAAGCACCAAGTTTGAGGATACAGAT
TCCATTGATGGATCCATGGCAGATGGCATGGAGCACATATTCAGCTGTTG
CACCCAGTTGCGCTATGGTCGGGATCTTCGATTAAATGAGGTTAGGCGCC
TTCTATGCTCAGCAAGACCTGTGGCTATTCAAACATCTGTCAACCCTAGT
GCCTCTGATCAGGACCTCCAACAGGCTCAGCTCTGGCAACTTGCACAAAG
GACTACGGCTCTTCCTCTTGGCCGTGGGGCGTTTACTCTTGCGACCATAT
ATACTCTTTTAACAGAGGCCTTTACTGTCCCAAAGCTTGTTTTAGCAGGT
CGGTTGCCAGCCCAACAAAATGCTACTGTTAATCTTGATCCAAGCATAAG
GAACATACAAGAACTTAAATCTTTGCCAGAGTTCCACAATGCTGTTGCTG
CTGGGTTAAGGCTGGCCCCACTTCAGGGCAAAGTGTCAAGAACATGGATA
GTATATAACAAGCCTGAGGAACCAAACGTAATTCATGCCGGACTTCTCCT
TGCTCTGGGATTACACGGATTTCTGCATGTTTTAACTATTACGGACATAT
ACCAGTATTTTTCACAGGAACATGAAAGCACAACTGTAGGTTTAATGCTT
GGCCTGGCAGCTTCATACAGAGGGACTATGCAACCTGCAATATCTAAGTG
CCTTTATGTTCATATACCTGCTCAACATCCATCTTCCTTTCCAGAGTTGG
AGTTACCAACACTGCTGCAGACTGCAGCACTAATGTCAGTTGGGCTTCTT
TTTGAAGGATCAGCGCACCCCCAAACAATGCAAACATTATTGGGTGAAAT
AGGCCGAAGAAGTGGAGGTGACAACGTCCTTGAAAGGGAGGGTTATGCCG
TTTCTGCAGGCTTTTCATTGGGACTTGTTGCATTGGGCCGAGGGGAAGAT
GCGTTGGGATTTATGGATACGGTGGTTGATCGACTATTCCACTATATTGG
TGGAAAGGAAATTCGTAATGAAAGATCCCTCCTGCTTGCACCGTCAATGG
ATGAAAACAACCGGGGCGCTGGGCAGATGATGGATGGAACCACTGTCAAT
GTTGATGTCACTGCACCTGGGGCTATAATAGCTCTTGCTCTAATGTTTTT
GAAGAGTGAATCAGAGGTGATTGTATCTAGGCTTACAATCCCTCAAACAC
ATTTTGATTTGCAATATGTGAGACCTGATTTTATAATGCTTCGCGTCATT
GCTCGGAATTTGATAATGTGGGCCAGGATTCATCCCTCTAAAGATTGGAT
TCAATCCCAGATTCCTGAAATTGTCAAAAATGGTGTCAAAGGCCTTAGAG
ATGATACCATGGATATTGATGAAATGGATGCAGAAACTTTTGTCCAGGCA
TATGTCAATATAGTCGCTGGGGCATGTATTTCTCTTGGGTTGAAATTTGC
TGGCACAAAGGATGCAAATGCACAGGAGTTGCTTTATGAATATGCTGTCT
ACTTTCTGAATGAGATCAAGCCCATTTCCACTACAAGTGGGAATACCTTC
CCCAAGGGTTTATCTCAGTACGTTGATCGAGGCACCTTGGAGATATGCCT
TCATCTTGTTGTTCTCTCCCTGTCTGTGGTTATGGCTGGTTCTGGACATC
TACAAACCTTCCGGCTTTTAAGGTTTCTCCGTAACCGGAGCTCTATAGAT
GGGCATGCTAATTATGGTATCCAGATGGCGGTGAGCTTAGCAATTGGGTT
CCTGTTTCTTGGTGGAGGCATGAGGACATTTTCTACCAGCAACAGTTCTG
TTGCTGCATTGCTTATAACTCTTTATCCACGGTTGCCTACTGGACCAAAT
GATAACCGTTGCCACCTTCAGGCATTCAGACATATGTATGTCCTTGCAAC
GGAGGCTCGCTGGCTTCAAACTGTTGATGTCGACACTGGCCTCCCTGTTT
ATGCTCCTCTTGAAGTTACAATCAGGGAAACTGAGCATTATTCAGAAACA
AGTTTTTGTGAGGTTACTCCTTGCATTCTGCCTGAGCGTTCTGTATTAAA
GACAGTTCGTGTCTGTGGCCCTCGATACTGGCCTCAAGTGATTGAGCTTG
TTCCTGAAGACAAGCCTTGGTGGAGTTTTACAGACAGGAATGACCCATTT
AACTCTGGTATCCTCCATGTGAAACGGAAGGTTGGAGCTTGTTCCTATGT
GGATGATCCCATAGGGTGTCAATCACTGCTCTCGCGAGCAATGCACAAGG
TGTTTGGTTTGACAACTCTAACAGCAAGCAATCCAAGTAATAATAGCAAC
AATGGACCTGCTGCTGTTACTGTTGACCAGCTGGTCAGCACATTCTCATC
TGATCCAAGCTTAATAGCTTTTGCACAACTTTGCTGTGACCTCTCCTGGA
ATAGCAGGTATGATGCTGATTTCCAGGAGTTTTGCTTGCAAGTATTATTT
GAGTGCATAAGCAAGGACAGACCAGCTCTTTTGCAGGTCTATTTGTCCTT
GTACGCCACGATTGGCTCCTTGGCAGAGCAGGTTTCCAGTAGTACTGTTG
TTGTCAGTAACTCACTATCCGTCTCTAGTTTAAAGCTTGCCCTGTCTTAC
AATGAGGCTGTGTTGAGTGGAAGGTTGACCACTTCAAGAGGTGGCATTGT
TCAGTCCATCTTTTTAGGGTCTCTTAGGAAACGGGTCGAAGAACTCCTAA
ATTGTTCGGAGGCATTAAAAGATGATTTGCGTAATTATTTGAACTTGGGA
CGTTGGCCTAGCGATCCATCCTTCGGAGTGAAAAGTCCAGCACTTCTTTC
TTGGTATCTTCAATGGTTTGGTGTACCAGCTCCTCCTATAATCAAGACAG
CAGTGGACAAAATTAAGCCCAAGAACATCTCATCATCTACCGCACCTTTG
TTACGTTTGTTATTACCAGGCACTCACGTAAATGCAATCGAAGAGATAGA
TCGAATTTTGTTTTCTTCCTGA
back to top

protein sequence of Tc10v2_p001250.1

>Tc10v2_p001250.1 ID=Tc10v2_p001250.1|Name=Tc10v2_p001250.1|organism=Theobroma cacao|type=polypeptide|length=1824bp
MPVGVRQLTVLGEFKPFGLIAEALDGKPPDNSADNYDYLLFDPEIARQRD
ENLDNDASASALSDRRDHELFIRGNRIIWSVGSRVFKRFTLPSPVIKACW
CRMGDMSEALLCVLQIDSLTIYNISGEVVSIPLPYSIISIWSLPFGLLLQ
QVADGNSLTHGPFKFSSPSLGSRDIIRNRRESGYSPQHSFSFLTAYDHLI
KGESSSMSSHLILKDLLEEPQSIYIEERGKLNIMRDFDERTIWTSDLIPL
MASYNKVKMQHSVWVAEVINSSLEVENASVSAIVPTGVLPKRFCFRRIWQ
GKGAHTAASKVFLATDDDAAPVICFLLLEQKKLLSLRLQTVEINNEILFD
VKPDMSWSIPAIAAAPVIVTRPGVKVGPLPYTDIIVLAPENILLLYSGKL
CLCRYLLPTCLGRGNLSHNIGFSGAASVPPHDLKIVGLADAVEAHINVKV
NNRQMFRCALRRSPSSSLANDCITAMAEGLSPSFYNHFLVLLWGDGDSGY
LSEANSTVGSEWNAFCDIIMQMCKKSSVVSQEIPKSSWEFLLNSKFHENY
LKINSIIGLSSRIALDRPGLDSIRSNIDGSKNSEKSFYFDLLMESLDSLH
AVYESLKMDNLRRRDLELLAILLCNIAKFLGEECYLDHYVRDFPALSKTV
RMGTNSLSRKTPFSLFRWLENCLQHGCTPANSNYLPLVICKDGSSVVSWA
RKIVSFYSLLCGAKLIGKKLSSGVSCNIASGSFCSNEELTVLAMVGEKFG
LKELDSLPSGVSLPLRHALDKCRESPPAGWPAAAYVLLGREDLALSCLAH
SCKFKELETQTNVNLVPMSTPYMLHLHPVTIPSTVSDTIIPESTKFEDTD
SIDGSMADGMEHIFSCCTQLRYGRDLRLNEVRRLLCSARPVAIQTSVNPS
ASDQDLQQAQLWQLAQRTTALPLGRGAFTLATIYTLLTEAFTVPKLVLAG
RLPAQQNATVNLDPSIRNIQELKSLPEFHNAVAAGLRLAPLQGKVSRTWI
VYNKPEEPNVIHAGLLLALGLHGFLHVLTITDIYQYFSQEHESTTVGLML
GLAASYRGTMQPAISKCLYVHIPAQHPSSFPELELPTLLQTAALMSVGLL
FEGSAHPQTMQTLLGEIGRRSGGDNVLEREGYAVSAGFSLGLVALGRGED
ALGFMDTVVDRLFHYIGGKEIRNERSLLLAPSMDENNRGAGQMMDGTTVN
VDVTAPGAIIALALMFLKSESEVIVSRLTIPQTHFDLQYVRPDFIMLRVI
ARNLIMWARIHPSKDWIQSQIPEIVKNGVKGLRDDTMDIDEMDAETFVQA
YVNIVAGACISLGLKFAGTKDANAQELLYEYAVYFLNEIKPISTTSGNTF
PKGLSQYVDRGTLEICLHLVVLSLSVVMAGSGHLQTFRLLRFLRNRSSID
GHANYGIQMAVSLAIGFLFLGGGMRTFSTSNSSVAALLITLYPRLPTGPN
DNRCHLQAFRHMYVLATEARWLQTVDVDTGLPVYAPLEVTIRETEHYSET
SFCEVTPCILPERSVLKTVRVCGPRYWPQVIELVPEDKPWWSFTDRNDPF
NSGILHVKRKVGACSYVDDPIGCQSLLSRAMHKVFGLTTLTASNPSNNSN
NGPAAVTVDQLVSTFSSDPSLIAFAQLCCDLSWNSRYDADFQEFCLQVLF
ECISKDRPALLQVYLSLYATIGSLAEQVSSSTVVVSNSLSVSSLKLALSY
NEAVLSGRLTTSRGGIVQSIFLGSLRKRVEELLNCSEALKDDLRNYLNLG
RWPSDPSFGVKSPALLSWYLQWFGVPAPPIIKTAVDKIKPKNISSSTAPL
LRLLLPGTHVNAIEEIDRILFSS*
back to top