Tc10v2_t000030.8

Overview
NameTc10v2_t000030.8
Unique NameTc10v2_t000030.8
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length1854
Properties
Property NameValue
NoteProbable serine/threonine-protein kinase At4g35230
Model evidenceSupporting evidence includes similarity to: 3 ESTs, 65 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
Productprobable serine/threonine-protein kinase At5g41260, transcript variant X2
Cross References
External references for this mRNA
DatabaseAccession
GeneID18585703
GenbankXM_018129523.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc10v2_g000030Tc10v2_g000030Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc10v2_p000030.8Tc10v2_p000030.8Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto486028auto486028Theobroma cacaoexon
exon-auto486029auto486029Theobroma cacaoexon
exon-auto486030auto486030Theobroma cacaoexon
exon-auto486031auto486031Theobroma cacaoexon
exon-auto486032auto486032Theobroma cacaoexon
exon-auto486033auto486033Theobroma cacaoexon
exon-auto486034auto486034Theobroma cacaoexon
exon-auto486035auto486035Theobroma cacaoexon
exon-auto486036auto486036Theobroma cacaoexon
exon-auto486037auto486037Theobroma cacaoexon
exon-auto486038auto486038Theobroma cacaoexon
exon-auto486039auto486039Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto486040auto486040Theobroma cacaoCDS
CDS-auto486041auto486041Theobroma cacaoCDS
CDS-auto486042auto486042Theobroma cacaoCDS
CDS-auto486043auto486043Theobroma cacaoCDS
CDS-auto486044auto486044Theobroma cacaoCDS
CDS-auto486045auto486045Theobroma cacaoCDS
CDS-auto486046auto486046Theobroma cacaoCDS
CDS-auto486047auto486047Theobroma cacaoCDS
CDS-auto486048auto486048Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc10v2_t000030.8 ID=Tc10v2_t000030.8|Name=Tc10v2_t000030.8|organism=Theobroma cacao|type=mRNA|length=1854bp
ATGCTTTCCACTAATTTATACTTTTATTATTACTATTATTATTACGTAAT
GTTAACAAAAATCCTTCCTTGGAGTTATTATTTATACAAAAAACCCTATT
TTATATTATCACATCAAAAACTCACACTTGGAGTTAGTATTATTCTTTCA
ATTCACAACAAACAAAAAGGGCAAAAGTATTCACTTGGAACCCCCCATTC
AACTCCTCATTTTAGTCAACTTTCTTTCTTCCCACTCCTCAGTCCTGCCT
CCCCAAACTCTCAAGTCTTGTTCCAAGTTCCTACTATACTATACCACACT
TACTCTATACTCTACACTGGAGTCCTCCTGCTCCTGCTGCTCTTGCTTAT
ACTATTATATGTGAACAAAGGCAGACCAACAGTGATGGGCTGCTTTCAGT
CCAAAACCACCCATCTTCCATCCCCTGATCAAGATCCTCCTCCTCAAACC
AAGCCAGATCTAGATGGGGACGGGGAGCAGTCGTCATTGCCCGCATTCAA
GGAGTTCGGTCTGGTGGAGCTGCGGGCGGCGACCAACGGATTCAGCAGTG
AGCTGATAGTTTCAGAGAGCGGAGAGAAGGCTCCGAATGTGGTGTACAGA
GGGAAGCTGAAGAACAATCGAGTGGTGGCCATTAAGCGATTCTCGAGGCA
GTCATGGCCTGATCCTCACCAGTTCGTTAACGAAGCTGCTGGGGTTGGAA
AAGTCCGCCACAAAAGATTGGTCAATTTGATTGGCTGTTGCGCCGAGGGA
GACGAGCGCTTGTTGGTCGCTGAGTATATGCCTAATGATACCCTCTCTAA
GCATCTTTTCCACTGGGAGAAACAGCCTTTGCCATGGGAAATGCGCCTCA
GAGTTGCGTACCATATTGCACAAGCCCTTGATCACTGCAACGCTGAAAAC
CGTAAAATTTATCACGATTTAAATGCTTACAGAGTTCTTTTCGATGAGGA
TGGTGATCCTCGATTATCTAGTTTTGGATTGATGAAAAATAGCCGAGATG
GAAAAAGTTACAGTACTAATTTGGCTTATACTCCTCCGGAGTTTTTGAGG
ACAGGCAGGGTCATCCCTGAGAGTGTTATTTACAGTTATGGAACTGTTCT
CTTGGATCTCTTAAGTGGAAAGCATATTCCTCCCAGCCATGCATTGGACT
TGATAAGAGGAAAGAATTTATTGTTGTTAATGGATTCTTCTCTGGAAGGT
CAATATGCTAATGAAGATGCCAGCGAATTGGTTGAATTGGCTTCAAAATG
TCTTCAGTACGAGGCTAGAGATCGACCTGATATTGAATTCCTCCTTTCAG
CAGTGGTACCTCTTCAAAAGCAGAAAGAGGTTGCATCACATGTTCTAATG
GGTCTATCAAGAACCCCATCACTGTTGCCAACTATGCTTTCTGCACTTGG
AAAGGCATGTGCCAGGATGGATCTTACTGCAGTGCATGATATCTTGCTTA
AAACTGGTTATAGAGATGAAGAAGGTGCAGAAAATGAGCTGTCATTCCAA
GAGTGGACGCAACAGGTTCAAGATATGCTGAATACAAAGAAATTTGGGGA
TATTGCATTTAGAGACAAAGATTTTAAAAATGCTATTGATTACTACTCGA
AGTTGGTATCGATGATGTCTGTTCCTTCTGGTACTGTATTTGTGAGAAGA
GCCCTCTCATTCTTGATGATTGGTCAACCAGAATTTGCCTTGAGAGATGC
CATGCAGGCTCAGGTGTGCTTGCCCGAATGGCCCACTGCCTTCTACATGC
AAGCTCTTGCCCTCTCCAAGCTTGGAATGGAAACTGATGCGCAAGACATG
CTTAATGATGGAGCCTCATTTGAGGCAAAGAAGCAGAATGGCTGGCGTGT
CTAA
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protein sequence of Tc10v2_p000030.8

>Tc10v2_p000030.8 ID=Tc10v2_p000030.8|Name=Tc10v2_p000030.8|organism=Theobroma cacao|type=polypeptide|length=618bp
MLSTNLYFYYYYYYYVMLTKILPWSYYLYKKPYFILSHQKLTLGVSIILS
IHNKQKGQKYSLGTPHSTPHFSQLSFFPLLSPASPNSQVLFQVPTILYHT
YSILYTGVLLLLLLLLILLYVNKGRPTVMGCFQSKTTHLPSPDQDPPPQT
KPDLDGDGEQSSLPAFKEFGLVELRAATNGFSSELIVSESGEKAPNVVYR
GKLKNNRVVAIKRFSRQSWPDPHQFVNEAAGVGKVRHKRLVNLIGCCAEG
DERLLVAEYMPNDTLSKHLFHWEKQPLPWEMRLRVAYHIAQALDHCNAEN
RKIYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYSTNLAYTPPEFLR
TGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDLIRGKNLLLLMDSSLEG
QYANEDASELVELASKCLQYEARDRPDIEFLLSAVVPLQKQKEVASHVLM
GLSRTPSLLPTMLSALGKACARMDLTAVHDILLKTGYRDEEGAENELSFQ
EWTQQVQDMLNTKKFGDIAFRDKDFKNAIDYYSKLVSMMSVPSGTVFVRR
ALSFLMIGQPEFALRDAMQAQVCLPEWPTAFYMQALALSKLGMETDAQDM
LNDGASFEAKKQNGWRV*
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