Tc10v2_t000030.3

Overview
NameTc10v2_t000030.3
Unique NameTc10v2_t000030.3
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length1854
Properties
Property NameValue
Productprobable serine/threonine-protein kinase At5g41260, transcript variant X7
Model evidenceSupporting evidence includes similarity to: 3 ESTs, 65 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
NoteProbable serine/threonine-protein kinase At4g35230
Cross References
External references for this mRNA
DatabaseAccession
GeneID18585703
GenbankXM_018129529.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc10v2_g000030Tc10v2_g000030Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc10v2_p000030.3Tc10v2_p000030.3Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto485916auto485916Theobroma cacaoexon
exon-auto485917auto485917Theobroma cacaoexon
exon-auto485918auto485918Theobroma cacaoexon
exon-auto485919auto485919Theobroma cacaoexon
exon-auto485920auto485920Theobroma cacaoexon
exon-auto485921auto485921Theobroma cacaoexon
exon-auto485922auto485922Theobroma cacaoexon
exon-auto485923auto485923Theobroma cacaoexon
exon-auto485924auto485924Theobroma cacaoexon
exon-auto485925auto485925Theobroma cacaoexon
exon-auto485926auto485926Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto485927auto485927Theobroma cacaoCDS
CDS-auto485928auto485928Theobroma cacaoCDS
CDS-auto485929auto485929Theobroma cacaoCDS
CDS-auto485930auto485930Theobroma cacaoCDS
CDS-auto485931auto485931Theobroma cacaoCDS
CDS-auto485932auto485932Theobroma cacaoCDS
CDS-auto485933auto485933Theobroma cacaoCDS
CDS-auto485934auto485934Theobroma cacaoCDS
CDS-auto485935auto485935Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc10v2_t000030.3 ID=Tc10v2_t000030.3|Name=Tc10v2_t000030.3|organism=Theobroma cacao|type=mRNA|length=1854bp
ATGCTTTCCACTAATTTATACTTTTATTATTACTATTATTATTACGTAAT
GTTAACAAAAATCCTTCCTTGGAGTTATTATTTATACAAAAAACCCTATT
TTATATTATCACATCAAAAACTCACACTTGGAGTTAGTATTATTCTTTCA
ATTCACAACAAACAAAAAGGGCAAAAGTATTCACTTGGAACCCCCCATTC
AACTCCTCATTTTAGTCAACTTTCTTTCTTCCCACTCCTCAGTCCTGCCT
CCCCAAACTCTCAAGTCTTGTTCCAAGTTCCTACTATACTATACCACACT
TACTCTATACTCTACACTGGAGTCCTCCTGCTCCTGCTGCTCTTGCTTAT
ACTATTATATGTGAACAAAGGCAGACCAACAGTGATGGGCTGCTTTCAGT
CCAAAACCACCCATCTTCCATCCCCTGATCAAGATCCTCCTCCTCAAACC
AAGCCAGATCTAGATGGGGACGGGGAGCAGTCGTCATTGCCCGCATTCAA
GGAGTTCGGTCTGGTGGAGCTGCGGGCGGCGACCAACGGATTCAGCAGTG
AGCTGATAGTTTCAGAGAGCGGAGAGAAGGCTCCGAATGTGGTGTACAGA
GGGAAGCTGAAGAACAATCGAGTGGTGGCCATTAAGCGATTCTCGAGGCA
GTCATGGCCTGATCCTCACCAGTTCGTTAACGAAGCTGCTGGGGTTGGAA
AAGTCCGCCACAAAAGATTGGTCAATTTGATTGGCTGTTGCGCCGAGGGA
GACGAGCGCTTGTTGGTCGCTGAGTATATGCCTAATGATACCCTCTCTAA
GCATCTTTTCCACTGGGAGAAACAGCCTTTGCCATGGGAAATGCGCCTCA
GAGTTGCGTACCATATTGCACAAGCCCTTGATCACTGCAACGCTGAAAAC
CGTAAAATTTATCACGATTTAAATGCTTACAGAGTTCTTTTCGATGAGGA
TGGTGATCCTCGATTATCTAGTTTTGGATTGATGAAAAATAGCCGAGATG
GAAAAAGTTACAGTACTAATTTGGCTTATACTCCTCCGGAGTTTTTGAGG
ACAGGCAGGGTCATCCCTGAGAGTGTTATTTACAGTTATGGAACTGTTCT
CTTGGATCTCTTAAGTGGAAAGCATATTCCTCCCAGCCATGCATTGGACT
TGATAAGAGGAAAGAATTTATTGTTGTTAATGGATTCTTCTCTGGAAGGT
CAATATGCTAATGAAGATGCCAGCGAATTGGTTGAATTGGCTTCAAAATG
TCTTCAGTACGAGGCTAGAGATCGACCTGATATTGAATTCCTCCTTTCAG
CAGTGGTACCTCTTCAAAAGCAGAAAGAGGTTGCATCACATGTTCTAATG
GGTCTATCAAGAACCCCATCACTGTTGCCAACTATGCTTTCTGCACTTGG
AAAGGCATGTGCCAGGATGGATCTTACTGCAGTGCATGATATCTTGCTTA
AAACTGGTTATAGAGATGAAGAAGGTGCAGAAAATGAGCTGTCATTCCAA
GAGTGGACGCAACAGGTTCAAGATATGCTGAATACAAAGAAATTTGGGGA
TATTGCATTTAGAGACAAAGATTTTAAAAATGCTATTGATTACTACTCGA
AGTTGGTATCGATGATGTCTGTTCCTTCTGGTACTGTATTTGTGAGAAGA
GCCCTCTCATTCTTGATGATTGGTCAACCAGAATTTGCCTTGAGAGATGC
CATGCAGGCTCAGGTGTGCTTGCCCGAATGGCCCACTGCCTTCTACATGC
AAGCTCTTGCCCTCTCCAAGCTTGGAATGGAAACTGATGCGCAAGACATG
CTTAATGATGGAGCCTCATTTGAGGCAAAGAAGCAGAATGGCTGGCGTGT
CTAA
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protein sequence of Tc10v2_p000030.3

>Tc10v2_p000030.3 ID=Tc10v2_p000030.3|Name=Tc10v2_p000030.3|organism=Theobroma cacao|type=polypeptide|length=618bp
MLSTNLYFYYYYYYYVMLTKILPWSYYLYKKPYFILSHQKLTLGVSIILS
IHNKQKGQKYSLGTPHSTPHFSQLSFFPLLSPASPNSQVLFQVPTILYHT
YSILYTGVLLLLLLLLILLYVNKGRPTVMGCFQSKTTHLPSPDQDPPPQT
KPDLDGDGEQSSLPAFKEFGLVELRAATNGFSSELIVSESGEKAPNVVYR
GKLKNNRVVAIKRFSRQSWPDPHQFVNEAAGVGKVRHKRLVNLIGCCAEG
DERLLVAEYMPNDTLSKHLFHWEKQPLPWEMRLRVAYHIAQALDHCNAEN
RKIYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYSTNLAYTPPEFLR
TGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDLIRGKNLLLLMDSSLEG
QYANEDASELVELASKCLQYEARDRPDIEFLLSAVVPLQKQKEVASHVLM
GLSRTPSLLPTMLSALGKACARMDLTAVHDILLKTGYRDEEGAENELSFQ
EWTQQVQDMLNTKKFGDIAFRDKDFKNAIDYYSKLVSMMSVPSGTVFVRR
ALSFLMIGQPEFALRDAMQAQVCLPEWPTAFYMQALALSKLGMETDAQDM
LNDGASFEAKKQNGWRV*
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