Tc09v2_t030160.1

Overview
NameTc09v2_t030160.1
Unique NameTc09v2_t030160.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length1818
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 8 ESTs, 45 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
Productprobable WRKY transcription factor 33
NotePutative Probable WRKY transcription factor 25
Cross References
External references for this mRNA
DatabaseAccession
GeneID18591046
GenbankXM_018128012.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc09v2_g030160Tc09v2_g030160Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc09v2_p030160.1Tc09v2_p030160.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto484433auto484433Theobroma cacaoexon
exon-auto484434auto484434Theobroma cacaoexon
exon-auto484435auto484435Theobroma cacaoexon
exon-auto484436auto484436Theobroma cacaoexon
exon-auto484437auto484437Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto484438auto484438Theobroma cacaoCDS
CDS-auto484439auto484439Theobroma cacaoCDS
CDS-auto484440auto484440Theobroma cacaoCDS
CDS-auto484441auto484441Theobroma cacaoCDS
CDS-auto484442auto484442Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc09v2_t030160.1 ID=Tc09v2_t030160.1|Name=Tc09v2_t030160.1|organism=Theobroma cacao|type=mRNA|length=1818bp
ATGGCTTCCTCTTGTAGCAGCCTGGATACGTCCGCCAATTCCCACCCGCA
AAACGCCTTTAGTTTCTCCGCACATCCCTTCATGACGACCTCTTTTTCTG
ACCTCCTGGCCTCCGGTGGTGCCGACGATGAAAACCCTTCCGCCACTTTC
GATGGTGGCGTTGATGCCAAGCGTGGAGGTGGTGGTGGGTTGTCGCTGTC
CGATCGGATTGCGGAGAGCACTGGTTCGGGTGTGCCTAAGTTTAAGTCAC
TTCCTCCCCCTTCACTGCCTATCTCTCCCCCTCCCGTGTCTCCTTCCTCT
TACTTTGCTATCCCGGCAGGTCTGAGCCCAGCTGAGCTTTTGGACTCTCC
TGTTTTGTTGAACGCTTCTAACGTTCTGCCATCTCCAACCACTGGAACAT
TTCCGGCTCAGGCTTTCAATTGGAAATCGAATTCTGGAAACAACCTGCAA
AACGTAAAACAGGAAGACAAGAACTACTCTAATTTCACTTTCCAAACCCA
GCCAAGGCCAGCCACCTCTTCATCAAGCATGTTTCAATCGTCAACAAACA
CAATTCAGACTGCACAACAACAAGCTTGGAGTTTCCAAGAGTCTGTAAAG
CAAGACGATTTTTCCTCAGGGAAGAGCATGGTAAAACCTGAATACACTCA
GATGCAGAGCTTTTCCCCTGAGATTGCCAACATTCAAGGTAACTCTCAAA
GCAACAGCGGCTTCCAATCGGAATATACCAAATTCCAGCAGCAACCTCAG
TCAATTAGAGAGAACAGAAGATCAGATGATGGATACAATTGGAGGAAATA
TGGACAAAAACAAGTGAAAGGAAGCGAAAACCCACGAAGCTACTACAAGT
GCACGTTCCCCAACTGTCCCACAAAGAAGAAGGTTGAAAGGTCTTTAGAT
GGGCAGATAACTGAGATAGTTTACAAGGGTAGTCATAACCATCCTAAGCC
TCAGTCCACTAGGAGATCATTATCATCTTCTTCATCTTCCATTGTTATTC
AGACTTCGAGTGCTGCCAGTGCTGAGATTCCGGATCAGTCATTTGCAACT
CATGGCAGTGGACAGATGGATTCTGTTGCAACCCCGGAAAATTCCTCTAT
ATCAGTCGGGGATGATGATTTCGATCAGGGTTCCCAGAAGAGTAAATCTG
GAGGAGATGAGTTTGATGAAGACGAGCCTGAGGCCAAAAGATGGAAAAGT
GAAGGTGAAAATGAAGGAATTTCAGCCCCTGGGAGCAGAACTGTGAGGGA
ACCTAGAGTTGTGGTTCAAACAACCAGTGACATTGATATTTTGGATGATG
GATACAGATGGAGAAAATATGGGCAGAAAGTGGTCAAGGGAAATCCAAAT
CCAAGGAGCTACTACAAGTGCACACATCCAGGATGTCCAGTGAGAAAGCA
TGTTGAGCGAGCATCCCATGATCGTAGGGCAGTGATCACAACTTATGAGG
GGAAGCACAACCACGATGTCCCAGCAGCTCGCGGCAGTGGCAGCCATTCT
GTCAATAGACCTTTACCAGACAACAACAACAACAATAATTGTAACAACAA
TGCAGCAATGGCAATAAGGCCATCAGCTGTTAACAATCACTCTGACCATT
CCGTGACCAACCCTCTTCGCAGTTTGAGGCCACCGACAGCCGAAGGGCAA
GCACCCTTCACGCTGGAGATGTTGCAGGGGACTGGGAACTTTGGATTCTC
AGGATTTAGCAACTCCATGGGGTCTTTCATGAATCAGCCACAACACGTGA
ACAATATGTTTTCCAGAACCAAGGAAGAACCAAGAGATGAGGTGTTCATC
GAGTCTTTACTATGTTGA
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protein sequence of Tc09v2_p030160.1

>Tc09v2_p030160.1 ID=Tc09v2_p030160.1|Name=Tc09v2_p030160.1|organism=Theobroma cacao|type=polypeptide|length=606bp
MASSCSSLDTSANSHPQNAFSFSAHPFMTTSFSDLLASGGADDENPSATF
DGGVDAKRGGGGGLSLSDRIAESTGSGVPKFKSLPPPSLPISPPPVSPSS
YFAIPAGLSPAELLDSPVLLNASNVLPSPTTGTFPAQAFNWKSNSGNNLQ
NVKQEDKNYSNFTFQTQPRPATSSSSMFQSSTNTIQTAQQQAWSFQESVK
QDDFSSGKSMVKPEYTQMQSFSPEIANIQGNSQSNSGFQSEYTKFQQQPQ
SIRENRRSDDGYNWRKYGQKQVKGSENPRSYYKCTFPNCPTKKKVERSLD
GQITEIVYKGSHNHPKPQSTRRSLSSSSSSIVIQTSSAASAEIPDQSFAT
HGSGQMDSVATPENSSISVGDDDFDQGSQKSKSGGDEFDEDEPEAKRWKS
EGENEGISAPGSRTVREPRVVVQTTSDIDILDDGYRWRKYGQKVVKGNPN
PRSYYKCTHPGCPVRKHVERASHDRRAVITTYEGKHNHDVPAARGSGSHS
VNRPLPDNNNNNNCNNNAAMAIRPSAVNNHSDHSVTNPLRSLRPPTAEGQ
APFTLEMLQGTGNFGFSGFSNSMGSFMNQPQHVNNMFSRTKEEPRDEVFI
ESLLC*
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