Tc09v2_t029330.2

Overview
NameTc09v2_t029330.2
Unique NameTc09v2_t029330.2
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length726
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 2 ESTs, 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
Productlactoylglutathione lyase, transcript variant X1
NoteLactoylglutathione lyase
Cross References
External references for this mRNA
DatabaseAccession
GeneID18590952
GenbankXM_018128523.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc09v2_g029330Tc09v2_g029330Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc09v2_p029330.2Tc09v2_p029330.2Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto482889auto482889Theobroma cacaoexon
exon-auto482890auto482890Theobroma cacaoexon
exon-auto482891auto482891Theobroma cacaoexon
exon-auto482892auto482892Theobroma cacaoexon
exon-auto482893auto482893Theobroma cacaoexon
exon-auto482894auto482894Theobroma cacaoexon
exon-auto482895auto482895Theobroma cacaoexon
exon-auto482896auto482896Theobroma cacaoexon
exon-auto482897auto482897Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto482898auto482898Theobroma cacaoCDS
CDS-auto482899auto482899Theobroma cacaoCDS
CDS-auto482900auto482900Theobroma cacaoCDS
CDS-auto482901auto482901Theobroma cacaoCDS
CDS-auto482902auto482902Theobroma cacaoCDS
CDS-auto482903auto482903Theobroma cacaoCDS
CDS-auto482904auto482904Theobroma cacaoCDS
CDS-auto482905auto482905Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc09v2_t029330.2 ID=Tc09v2_t029330.2|Name=Tc09v2_t029330.2|organism=Theobroma cacao|type=mRNA|length=726bp
ATGTCAAAAAATATGGCTTTGTTTTCGATCACCGCCGCATTATCTCGATG
TTCTCTGCTTCATCTAACCAGACAACCTTGCTTATCACCTTCTTTACTTT
CATTTTCTTTCATTTCAAAACAAACCCATCAACCAAAGGATCGAAACCGA
TTTAGGTTGTATTCAATGGCATCATCGGACTCGAAAGAATCAGCTGCTAA
TAACCCTGGACTTCAATCTACCCCTGATGAAGCCACCAAAGGCTATTTCA
TGCAGCAAACTATGCTTCGAATTAAGGATCCAAAAGTCAGTCTTGATTTT
TACTCTCGTGTATTAGGCATGTCGTTGCTTAAGAGGATAGATGTTCCAGA
ATTGAAGTTTACCTTGTACTTTTTGGGCTACGAGGATGTTGCATCAGCTC
CAAGGGACCCAATTGATAGAACAGTTTGGACCTTTGGAAAACCAGCAACA
GTTGAACTGACGCATAATTGGGGTACTGAAAGCGACCCTGACTTCAAAGG
ATATCACAATGGCAATTCAGATCCTCGTGGCTTTGGGCATATTGGCATTA
CCGTGGATGATACACGCAAGGCATGTGAGAGATTTGAACGCCTCGGAGTA
GAGTTTGTCAAAAAACCGGATGATGGCAAGATGAAAGGAATTGCATTCAT
TAAGGATCCTGATGGTTACTGGATTGAAATCTTTGATTTGAAAACTATTG
GAGAAGTAGTTAGGGGTTGGGCTTGA
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protein sequence of Tc09v2_p029330.2

>Tc09v2_p029330.2 ID=Tc09v2_p029330.2|Name=Tc09v2_p029330.2|organism=Theobroma cacao|type=polypeptide|length=242bp
MSKNMALFSITAALSRCSLLHLTRQPCLSPSLLSFSFISKQTHQPKDRNR
FRLYSMASSDSKESAANNPGLQSTPDEATKGYFMQQTMLRIKDPKVSLDF
YSRVLGMSLLKRIDVPELKFTLYFLGYEDVASAPRDPIDRTVWTFGKPAT
VELTHNWGTESDPDFKGYHNGNSDPRGFGHIGITVDDTRKACERFERLGV
EFVKKPDDGKMKGIAFIKDPDGYWIEIFDLKTIGEVVRGWA*
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