Tc09v2_t029120.2

Overview
NameTc09v2_t029120.2
Unique NameTc09v2_t029120.2
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length1329
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
Productphosphatidylinositol N-acetylglucosaminyltransferase subunit A, transcript variant X1
NoteUDP-Glycosyltransferase superfamily protein isoform 1
Cross References
External references for this mRNA
DatabaseAccession
GeneID18590927
GenbankXM_018127760.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc09v2_g029120Tc09v2_g029120Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc09v2_p029120.2Tc09v2_p029120.2Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto482494auto482494Theobroma cacaoexon
exon-auto482495auto482495Theobroma cacaoexon
exon-auto482496auto482496Theobroma cacaoexon
exon-auto482497auto482497Theobroma cacaoexon
exon-auto482498auto482498Theobroma cacaoexon
exon-auto482499auto482499Theobroma cacaoexon
exon-auto482500auto482500Theobroma cacaoexon
exon-auto482501auto482501Theobroma cacaoexon
exon-auto482502auto482502Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto482503auto482503Theobroma cacaoCDS
CDS-auto482504auto482504Theobroma cacaoCDS
CDS-auto482505auto482505Theobroma cacaoCDS
CDS-auto482506auto482506Theobroma cacaoCDS
CDS-auto482507auto482507Theobroma cacaoCDS
CDS-auto482508auto482508Theobroma cacaoCDS
CDS-auto482509auto482509Theobroma cacaoCDS
CDS-auto482510auto482510Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc09v2_t029120.2 ID=Tc09v2_t029120.2|Name=Tc09v2_t029120.2|organism=Theobroma cacao|type=mRNA|length=1329bp
ATGGCTGACCTGAAGCACAGAATTCTTATGGTGTCTGATTTTTTCTATCC
CAACTTTGGTGGTGTTGAGAGTCACATTTATTATCTGTCCCAATGCCTCC
TAAAACTTGGTCACAAGGTGGTTGTTATGACCCATGCTTATGGAAATCGA
TCAGGAGTGAGATACATGACAGGTGGTCTGAAGGTTTATTATGTACCCTG
GCAGCCATTTCTTATGCAGAACACATTGCCGACTTTTTACGGGACATTAC
CAATAATAAGGACTATACTTATTCGGGAAAAGATATCACTTGTGCATGGT
CATCAGGCCTTCTCGACTCTATGTCATGAGGCTTTGATGCATGCGCGCAC
TATGGGATACAAGGTTGTATTTACTGATCATTCTTTGTATGGTTTTGCTG
ATGTGGGAAGCATCCACATGAACAAGGTTCTGCAGTTTACTTTGGCAGAT
GTAACCCGGGCCATTTGTGTTTCTCACACGAGCAAGGAAAATACAGTGCT
ACGGTCAGGTTTGCCACCAGAAAAGGTTTTTGTGATTCCTAATGCTGTGG
ACACCGCTATGTTCAAGCCTGCTCAAGAGCGACTTGGCCATAATGAAATT
GTTATTGTTGTGATAAGTAGATTGGTTTATCGAAAGGGTGCAGATTTGCT
TGTGGAAGTCATTCCAGAAGTTTGCCGCTTGTATCCTAATGTTCGTTTCA
TTGTTGGAGGAGATGGACCTAAACGAGTGAGGTTGGAAGAGATGAGAGAA
AAGCATTCTCTTCAAGATCGAGTTGAGATGTTGGGGGCTGTACCACATGC
TTCTGTACGGTCTGTGCTGATTTCTGGCCACATATTCTTAAACAGTTCTT
TAACAGAAGCTTTTTGCATAGCCATATTGGAGGCTGCAAGTTGTGGATTA
TTAACTGTCAGTACACGTGTTGGAGGAGTCCCAGAGGTTTTACCAGATGA
CATGATAGTACTTGCTGAACCAGATCCTAGTGACATGGTACAAGCAATTA
AGAAGGCAATATCTATCGTTCCTGAGATTGATCCACTAGTTATGCATGAT
CGTATGAAGAGGCTTTATAATTGGAATGATGTTGCAAAAAGGACAGAGAT
AGTGTATAATCGTGCTTTGAAATGTTCTGATCAGAGTCTCCAAGAACGTC
TCTCACGGTATCTTTCATGTGGTGCTTGGGCAGGCAAGCTCTTTTGCTTG
GTTATGATAATCGACTTTTTGCTATGGCGACTTTTGGAACTATGGCAGCC
TGCAAAGGATATTGAGGAGGTGCCTGATGTCGTTCTACCCCGGGATCAAG
ATGGAGAAAACATTGAAGGATTTCGATGA
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protein sequence of Tc09v2_p029120.2

>Tc09v2_p029120.2 ID=Tc09v2_p029120.2|Name=Tc09v2_p029120.2|organism=Theobroma cacao|type=polypeptide|length=443bp
MADLKHRILMVSDFFYPNFGGVESHIYYLSQCLLKLGHKVVVMTHAYGNR
SGVRYMTGGLKVYYVPWQPFLMQNTLPTFYGTLPIIRTILIREKISLVHG
HQAFSTLCHEALMHARTMGYKVVFTDHSLYGFADVGSIHMNKVLQFTLAD
VTRAICVSHTSKENTVLRSGLPPEKVFVIPNAVDTAMFKPAQERLGHNEI
VIVVISRLVYRKGADLLVEVIPEVCRLYPNVRFIVGGDGPKRVRLEEMRE
KHSLQDRVEMLGAVPHASVRSVLISGHIFLNSSLTEAFCIAILEAASCGL
LTVSTRVGGVPEVLPDDMIVLAEPDPSDMVQAIKKAISIVPEIDPLVMHD
RMKRLYNWNDVAKRTEIVYNRALKCSDQSLQERLSRYLSCGAWAGKLFCL
VMIIDFLLWRLLELWQPAKDIEEVPDVVLPRDQDGENIEGFR*
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