Tc09v2_t028660.1

Overview
NameTc09v2_t028660.1
Unique NameTc09v2_t028660.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length504
Properties
Property NameValue
NoteSignal peptidase complex subunit 3B
Productsignal peptidase complex subunit 3B
Model evidenceSupporting evidence includes similarity to: 3 ESTs, 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
Cross References
External references for this mRNA
DatabaseAccession
GeneID18590871
GenbankXM_007016670.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc09v2_g028660Tc09v2_g028660Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc09v2_p028660.1Tc09v2_p028660.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto481161auto481161Theobroma cacaoexon
exon-auto481162auto481162Theobroma cacaoexon
exon-auto481163auto481163Theobroma cacaoexon
exon-auto481164auto481164Theobroma cacaoexon
exon-auto481165auto481165Theobroma cacaoexon
exon-auto481166auto481166Theobroma cacaoexon
exon-auto481167auto481167Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto481168auto481168Theobroma cacaoCDS
CDS-auto481169auto481169Theobroma cacaoCDS
CDS-auto481170auto481170Theobroma cacaoCDS
CDS-auto481171auto481171Theobroma cacaoCDS
CDS-auto481172auto481172Theobroma cacaoCDS
CDS-auto481173auto481173Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc09v2_t028660.1 ID=Tc09v2_t028660.1|Name=Tc09v2_t028660.1|organism=Theobroma cacao|type=mRNA|length=504bp
ATGCATTCATTTGGGTACAGATTAAATGCTCTGCTAACATTTGCTGTGAC
AATTCTGGCACTAATGTGCGCCATGGGGTCTCTCTCAGACAACGTCAACA
CTCCCTCTCCCTCTGCAGAAATCCAGATTATGAACATTAATTGGTTCCAG
AAGCAGCCGCAGGGGAATGATGAGGTCAGCTTGACAATGAACATATCAGC
TGATTTGCAGTCATTGTTTACATGGAACACGAAACAGGTCTTCATATTTG
TAGCAGCTGAGTACGAAACCCCAAAGAATTCGTTGAATCAGGTGTCACTT
TGGGATGCCATAATACCCGCCAAAGAGCATGCAAAGTTTTGGATCCACAC
CTCAAACAAATATCGTTTTGTTGATCAGGGAAACAATCTCCGTGGCAAAA
AATTCAACTTGACATTGCATTGGCATGTTATGCCTAAGACTGGAAAGATG
TTTGCCGACAAATTAGTCATGACGGGTTATAGTTTGCCAGAGGAATATAG
ATAA
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protein sequence of Tc09v2_p028660.1

>Tc09v2_p028660.1 ID=Tc09v2_p028660.1|Name=Tc09v2_p028660.1|organism=Theobroma cacao|type=polypeptide|length=168bp
MHSFGYRLNALLTFAVTILALMCAMGSLSDNVNTPSPSAEIQIMNINWFQ
KQPQGNDEVSLTMNISADLQSLFTWNTKQVFIFVAAEYETPKNSLNQVSL
WDAIIPAKEHAKFWIHTSNKYRFVDQGNNLRGKKFNLTLHWHVMPKTGKM
FADKLVMTGYSLPEEYR*
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