Tc09v2_t028310.2

Overview
NameTc09v2_t028310.2
Unique NameTc09v2_t028310.2
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length753
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 1 mRNA, 72 ESTs, 45 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
ProductL-ascorbate peroxidase, cytosolic, transcript variant X2
NoteL-ascorbate peroxidase 2, cytosolic
Cross References
External references for this mRNA
DatabaseAccession
GeneID18590832
GenbankXM_018128110.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc09v2_g028310Tc09v2_g028310Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc09v2_p028310.2Tc09v2_p028310.2Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto480217auto480217Theobroma cacaoexon
exon-auto480218auto480218Theobroma cacaoexon
exon-auto480219auto480219Theobroma cacaoexon
exon-auto480220auto480220Theobroma cacaoexon
exon-auto480221auto480221Theobroma cacaoexon
exon-auto480222auto480222Theobroma cacaoexon
exon-auto480223auto480223Theobroma cacaoexon
exon-auto480224auto480224Theobroma cacaoexon
exon-auto480225auto480225Theobroma cacaoexon
exon-auto480226auto480226Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto480227auto480227Theobroma cacaoCDS
CDS-auto480228auto480228Theobroma cacaoCDS
CDS-auto480229auto480229Theobroma cacaoCDS
CDS-auto480230auto480230Theobroma cacaoCDS
CDS-auto480231auto480231Theobroma cacaoCDS
CDS-auto480232auto480232Theobroma cacaoCDS
CDS-auto480233auto480233Theobroma cacaoCDS
CDS-auto480234auto480234Theobroma cacaoCDS
CDS-auto480235auto480235Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc09v2_t028310.2 ID=Tc09v2_t028310.2|Name=Tc09v2_t028310.2|organism=Theobroma cacao|type=mRNA|length=753bp
ATGACGAAGTGTTACCCGACTGTGAGCGAGGAATACAAGAAGGCCGTTGA
GAAGGCCAAGCGCAAGCTCAGGGGTCTCATCGCCGAGAAGAACTGTGCCC
CAATCATGCTCCGTTTAGCATGGCACTCAGCTGGAACTTTCGATGTTAAG
ACCAGGACCGGAGGTCCATTCGGAACGATGAAGCAGCCTGCTGAGCTGGC
ACATGGTGCTAACAACGGTCTCGATATTTCTGTTAGGCTTCTCGAGCCGA
TCAAGGAGCAGTTCCCTAATCTCACTTACGCTGACTTCTACCAGCTTGCC
GGTGTCGTCGCTGTCGAGATCACTGGTGGACCTGAAATTCCGTTCCACCC
CGGAAGAGAGGACAAGCCTCACCCACCACCTGAGGGCCGTCTTCCTGATG
CTACCAAGGGAGCTGATCACTTGAGGCAGGTCTTTACTGCTCAAATGGGT
CTTAGCGACCAGGACATTGTTGCCCTTTCTGGTGGCCACACCCTGGGAAG
GTGCCACAAGGAGAGGTCTGGATTTGAGGGACCATGGACTACCAACCCCC
TCATCTTTGACAACTCTTACTTCAAGGAGCTCTTGGCTGGAGAGAAGGAA
GACCTTTTGAAGTTGCCAACTGACGTAGTTCTCCTGTCTGACCCTGTTTT
CCGTCCACTTGTTGATAAATATGCTGCTGATGAGGATGCCTTCTTTGCCG
ACTACACTGAAGCTCACCTGAAGCTCTCTGAGCTAGGATTTGCTGATGCA
TAA
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protein sequence of Tc09v2_p028310.2

>Tc09v2_p028310.2 ID=Tc09v2_p028310.2|Name=Tc09v2_p028310.2|organism=Theobroma cacao|type=polypeptide|length=251bp
MTKCYPTVSEEYKKAVEKAKRKLRGLIAEKNCAPIMLRLAWHSAGTFDVK
TRTGGPFGTMKQPAELAHGANNGLDISVRLLEPIKEQFPNLTYADFYQLA
GVVAVEITGGPEIPFHPGREDKPHPPPEGRLPDATKGADHLRQVFTAQMG
LSDQDIVALSGGHTLGRCHKERSGFEGPWTTNPLIFDNSYFKELLAGEKE
DLLKLPTDVVLLSDPVFRPLVDKYAADEDAFFADYTEAHLKLSELGFADA
*
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