Tc09v2_t028310.1

Overview
NameTc09v2_t028310.1
Unique NameTc09v2_t028310.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length753
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 1 mRNA, 103 ESTs, 45 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
ProductL-ascorbate peroxidase, cytosolic, transcript variant X1
NoteL-ascorbate peroxidase 2, cytosolic
Cross References
External references for this mRNA
DatabaseAccession
GeneID18590832
GenbankXM_007016591.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc09v2_g028310Tc09v2_g028310Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc09v2_p028310.1Tc09v2_p028310.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto480196auto480196Theobroma cacaoexon
exon-auto480197auto480197Theobroma cacaoexon
exon-auto480198auto480198Theobroma cacaoexon
exon-auto480199auto480199Theobroma cacaoexon
exon-auto480200auto480200Theobroma cacaoexon
exon-auto480201auto480201Theobroma cacaoexon
exon-auto480202auto480202Theobroma cacaoexon
exon-auto480203auto480203Theobroma cacaoexon
exon-auto480204auto480204Theobroma cacaoexon
exon-auto480205auto480205Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto480206auto480206Theobroma cacaoCDS
CDS-auto480207auto480207Theobroma cacaoCDS
CDS-auto480208auto480208Theobroma cacaoCDS
CDS-auto480209auto480209Theobroma cacaoCDS
CDS-auto480210auto480210Theobroma cacaoCDS
CDS-auto480211auto480211Theobroma cacaoCDS
CDS-auto480212auto480212Theobroma cacaoCDS
CDS-auto480213auto480213Theobroma cacaoCDS
CDS-auto480214auto480214Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc09v2_t028310.1 ID=Tc09v2_t028310.1|Name=Tc09v2_t028310.1|organism=Theobroma cacao|type=mRNA|length=753bp
ATGACGAAGTGTTACCCGACTGTGAGCGAGGAATACAAGAAGGCCGTTGA
GAAGGCCAAGCGCAAGCTCAGGGGTCTCATCGCCGAGAAGAACTGTGCCC
CAATCATGCTCCGTTTAGCATGGCACTCAGCTGGAACTTTCGATGTTAAG
ACCAGGACCGGAGGTCCATTCGGAACGATGAAGCAGCCTGCTGAGCTGGC
ACATGGTGCTAACAACGGTCTCGATATTTCTGTTAGGCTTCTCGAGCCGA
TCAAGGAGCAGTTCCCTAATCTCACTTACGCTGACTTCTACCAGCTTGCC
GGTGTCGTCGCTGTCGAGATCACTGGTGGACCTGAAATTCCGTTCCACCC
CGGAAGAGAGGACAAGCCTCACCCACCACCTGAGGGCCGTCTTCCTGATG
CTACCAAGGGAGCTGATCACTTGAGGCAGGTCTTTACTGCTCAAATGGGT
CTTAGCGACCAGGACATTGTTGCCCTTTCTGGTGGCCACACCCTGGGAAG
GTGCCACAAGGAGAGGTCTGGATTTGAGGGACCATGGACTACCAACCCCC
TCATCTTTGACAACTCTTACTTCAAGGAGCTCTTGGCTGGAGAGAAGGAA
GACCTTTTGAAGTTGCCAACTGACGTAGTTCTCCTGTCTGACCCTGTTTT
CCGTCCACTTGTTGATAAATATGCTGCTGATGAGGATGCCTTCTTTGCCG
ACTACACTGAAGCTCACCTGAAGCTCTCTGAGCTAGGATTTGCTGATGCA
TAA
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protein sequence of Tc09v2_p028310.1

>Tc09v2_p028310.1 ID=Tc09v2_p028310.1|Name=Tc09v2_p028310.1|organism=Theobroma cacao|type=polypeptide|length=251bp
MTKCYPTVSEEYKKAVEKAKRKLRGLIAEKNCAPIMLRLAWHSAGTFDVK
TRTGGPFGTMKQPAELAHGANNGLDISVRLLEPIKEQFPNLTYADFYQLA
GVVAVEITGGPEIPFHPGREDKPHPPPEGRLPDATKGADHLRQVFTAQMG
LSDQDIVALSGGHTLGRCHKERSGFEGPWTTNPLIFDNSYFKELLAGEKE
DLLKLPTDVVLLSDPVFRPLVDKYAADEDAFFADYTEAHLKLSELGFADA
*
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