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Properties
Property Name | Value |
Model evidence | Supporting evidence includes similarity to: 6 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns |
Product | uncharacterized LOC18590831, transcript variant X3 |
Note | RNA binding family protein, putative isoform 1 |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Tc09v2_t028280.3 ID=Tc09v2_t028280.3|Name=Tc09v2_t028280.3|organism=Theobroma cacao|type=mRNA|length=3141bp ATGAGTGACGAGGGAGAAAAGACTTGCCCCCTTTGCGAGGAGGACATGGA TTTGACTGATCAGCAACTCAAGCCTTGCAAATGTGGTTATGAGATATGTG TTTGGTGTTGGCATCACATAATGGATATGGCTGAGAAGGATGAGACAGAG GGACGGTGCCCAGCATGTCGTAGTGCTTATGATAAAGAAAGGATTGTAGG GATGGCTGCGAATTGTGAGAGGTTGGTTGCTGAAATTAATATGGAGAGAA AGATGAAGTCACAAAAGGCAAAGACTAAATCTTCTGAAGGAAGGAAGCAA CTGAGCAGTGTGCGGGTGATTCAAAGGAATCTTGTTTACATAGTTGGGTT GCCACTTAATCTGGCAGATGAAGATCTTCTCCAGCAGCGAGAATATTTTG GTCAGTATGGGAAAGTTCTTAAAGTATCTATGTCTCGGACTGCAGCTGGT GTCATTCAGCAATTTCCAAACAATACATGTAGTGTATATATTACTTATTC AAAAGAAGAGGAAGCAATTCGTTGTATCCAGTCTGTACATGGGTTTGTCT TGGATGGTAGACCATTAAAGGCGTGCTTTGGTACAACAAAGTATTGTCAT GCATGGCTGAGAAATGTGCCTTGCAGCAATCCTGATTGTCTATATTTGCA CGAGATTGGTTCTCAAGAGGATAGTTTCACAAAAGATGAGATTATATCAG CATACACAAGGGTTCAACAAATAACCGGTGCAACAAACAATATGCAACGG CGTGCTGGAAATATGTTACCTCCACCACTGGATGATTATTGCCCCAACAG TTCTGCATCTGCAGCAAAACCTATTGCTAAAAATGCTCCAAATAATACAA CAGTGAGCATTCCTAAAGGTTCTCCTCCAAATGGAAGCTCTGTTAGATCT ATTGCTCTTCCTGCTGGAGCATCATGGGGAATGCGTGCCTTAAACCATCC ACAAACAGCTGGTTTAGCATGTTCAAATGGACCTTCTAAGCAGAAATCTG ATATGGTTAGCAGCACATTACCATTTTCATCTGCTGTGGCAAACACAAAT CAGGTTTCTACATTACATGGTGATGTTATAAAGAAGCCATCTGAGGAAAT TCATGCTATGCATATGATGGGTAAACCTGATTTGTTAAAACCTTTAAAAG AAAATGCCAGTTTAGATTGTCGAACTACTCCACTAGAGAAACCTCCTTCA CCTGATGTAGTTTCTGCTTCTAAATCATTGAGCAGCCAGTTATCTTGTCC ACCACCATCCAATTATAATGACCAGTGCACTAATATACCATCAAATGTTA CAAGCTCCACCTTTGACCATGCTGAGCAGTCTTTTATTTCCCCCAGTGAA AAAGAGGGGAATATTTCCTCTACTGATGGAAAGATACAGAGCTTGTGCTC GGATATGTCAGCACTGACCTTAGATAGGAATGTCTTGAATGGACTTTCCA GTTTAGTTAGACCAAGCAGTTCAGCTTCCGATCATGGATCAAGCAGCTCA CCTGGTAGTCAGGGGTTACAACAACGTTATATTGATCACTATCGAGAACC TTTAAGTTCACCAGCTGCTGGGAGAGCTGTGACATCTCCCAATGGGGTGT GTATTTCAAAAGAGCAGTCTGATTGGAGAACTGATATGCAAACTCAAGCA GTGGCAAATACAAGTTCTGAAGTAGAGGAAGACATATTGTCTTTTGATAA TCAAAGACTCAAGGATCCTGAAGTCATTAGCCGTTCAAGTTATGTGCCAA ATTCACCAAGTTCGCTCCATTTATCAAATCATTCTGGGTCCCATTCTTTG CATCGTAATGAAGGTTTAGGTGCCATTAATTTGAATGCTGATACTCTCTT TGTAGATAATAAACTTAGTGAGAGTCTACGTTTTCATGGATCTAGTGTTT CTTCTTTATCAAATGGATACCCTGAGAAGTACATAAGCAGTAGTAGTATT GGTTCTGATATTATCACAGAAGGCTCCCTTCTGCTTCCAAATGAAGGGAA AGGGAAGAAGATGGGAAGATTCCTTGGTAATGCTGGGAGCGATGCTGCTA AAGATACAGGAGAGAGCAGCATAATCTCAAACATATTGTCGCTAGATTTG GATACATGGGATGAGTCCCTAGCCTCACCTCAGAACTTGGCTAAGTTGTT TGGTGACACTGACAAGCAGCCCAGTTCTCTCAAATTATCTAGTTCCTGGA AAGGACAGAATAACAATCAGTCCAGATTCTCCTTTGCGAGACAGGAGGAT TCTAAATATCATCCATTTGATGTTGAGTCCTCATTTAGTGTCTTTGGGCA AATGCCAAGGAACCGCTCTTCCAGCCAAGATTTTGCAGAAAGCAGGGATC TCTATCTAAATAAGTTTGGAATTTCTAATGGTTTTTCTTCCGGTAACTTT GAGGAATCTGACAATTTTACCAGCAGTCCTTCAGTTTTCTCTTCTAATAA GCTTTCTGCAGTGTCAAGAGCTCAAATTTCAGCCCCACCTGGATTCTCTG TTCCTAGCAGGGCACCACCTCCAGGCTTTTCTTCTCATGAGAGAGTAGAC CATGGTTTTGACACAACATCTGGAATTCATTTGATGGACAATTCCTCCCT GTTAAGAAATTCTTATCAGGCTCCGGCAAGTGGTGGTATTGGTGGCTCTG GGGATATAGAATTTGTGGATCCAGCAATTTTGGCAGTTGGTAAGGGTAGT CTTCAGGGAGGGCTTAACAATTCAGGCTTAGACATGAGATCAAATTTTCC ACCACAGTTAGGTCCCTATGAAAACGAGGCCAGATTTCAACTATTGATGC AGAGATCTCTTTCTCCTCATCAGAACCTAAGATATGATGTCGGGGATAGC TTTTCTTCTCTTAGTGACTCTTATGGAATTTCTTCCAGGCTAATCGATCA ATCCCAGGTGAACAATATGTCCCCATTTGCACAGTTGTCTCTTCAACAGT CAAGGAATTCACACATGTCAAATGGTCATTGGGATGGATGGAATGAGGTT CAGGGTGGAAACAGTCTCGGTGTGGCAGAGCTCCTCAGAAATGATAGATT GGGATATAACAAGTTTTATTCCAGTTATGAAGGTTCAAAGTACAGGATGC CCACTTCGGGGGATCTGTATAACAGAACATTCGGGATGTGA back to topprotein sequence of Tc09v2_p028280.3 >Tc09v2_p028280.3 ID=Tc09v2_p028280.3|Name=Tc09v2_p028280.3|organism=Theobroma cacao|type=polypeptide|length=1047bp
MSDEGEKTCPLCEEDMDLTDQQLKPCKCGYEICVWCWHHIMDMAEKDETE GRCPACRSAYDKERIVGMAANCERLVAEINMERKMKSQKAKTKSSEGRKQ LSSVRVIQRNLVYIVGLPLNLADEDLLQQREYFGQYGKVLKVSMSRTAAG VIQQFPNNTCSVYITYSKEEEAIRCIQSVHGFVLDGRPLKACFGTTKYCH AWLRNVPCSNPDCLYLHEIGSQEDSFTKDEIISAYTRVQQITGATNNMQR RAGNMLPPPLDDYCPNSSASAAKPIAKNAPNNTTVSIPKGSPPNGSSVRS IALPAGASWGMRALNHPQTAGLACSNGPSKQKSDMVSSTLPFSSAVANTN QVSTLHGDVIKKPSEEIHAMHMMGKPDLLKPLKENASLDCRTTPLEKPPS PDVVSASKSLSSQLSCPPPSNYNDQCTNIPSNVTSSTFDHAEQSFISPSE KEGNISSTDGKIQSLCSDMSALTLDRNVLNGLSSLVRPSSSASDHGSSSS PGSQGLQQRYIDHYREPLSSPAAGRAVTSPNGVCISKEQSDWRTDMQTQA VANTSSEVEEDILSFDNQRLKDPEVISRSSYVPNSPSSLHLSNHSGSHSL HRNEGLGAINLNADTLFVDNKLSESLRFHGSSVSSLSNGYPEKYISSSSI GSDIITEGSLLLPNEGKGKKMGRFLGNAGSDAAKDTGESSIISNILSLDL DTWDESLASPQNLAKLFGDTDKQPSSLKLSSSWKGQNNNQSRFSFARQED SKYHPFDVESSFSVFGQMPRNRSSSQDFAESRDLYLNKFGISNGFSSGNF EESDNFTSSPSVFSSNKLSAVSRAQISAPPGFSVPSRAPPPGFSSHERVD HGFDTTSGIHLMDNSSLLRNSYQAPASGGIGGSGDIEFVDPAILAVGKGS LQGGLNNSGLDMRSNFPPQLGPYENEARFQLLMQRSLSPHQNLRYDVGDS FSSLSDSYGISSRLIDQSQVNNMSPFAQLSLQQSRNSHMSNGHWDGWNEV QGGNSLGVAELLRNDRLGYNKFYSSYEGSKYRMPTSGDLYNRTFGM* back to top
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