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Properties
Property Name | Value |
Model evidence | Supporting evidence includes similarity to: 6 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns |
Product | uncharacterized LOC18590831, transcript variant X4 |
Note | RNA binding family protein, putative isoform 1 |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Tc09v2_t028280.1 ID=Tc09v2_t028280.1|Name=Tc09v2_t028280.1|organism=Theobroma cacao|type=mRNA|length=3063bp ATGAGTGACGAGGGAGAAAAGACTTGCCCCCTTTGCGAGGAGGACATGGA TTTGACTGATCAGCAACTCAAGCCTTGCAAATGTGGTTATGAGATATGTG TTTGGTGTTGGCATCACATAATGGATATGGCTGAGAAGGATGAGACAGAG GGACGGTGCCCAGCATGTCGTAGTGCTTATGATAAAGAAAGGATTGTAGG GATGGCTGCGAATTGTGAGAGGTTGGTTGCTGAAATTAATATGGAGAGAA AGATGAAGTCACAAAAGGCAAAGACTAAATCTTCTGAAGGAAGGAAGCAA CTGAGCAGTGTGCGGGTGATTCAAAGGAATCTTGTTTACATAGTTGGGTT GCCACTTAATCTGGCAGATGAAGATCTTCTCCAGCAGCGAGAATATTTTG GTCAGTATGGGAAAGTTCTTAAAGTATCTATGTCTCGGACTGCAGCTGGT GTCATTCAGCAATTTCCAAACAATACATGTAGTGTGGCGTGCTTTGGTAC AACAAAGTATTGTCATGCATGGCTGAGAAATGTGCCTTGCAGCAATCCTG ATTGTCTATATTTGCACGAGATTGGTTCTCAAGAGGATAGTTTCACAAAA GATGAGATTATATCAGCATACACAAGGAGTAGGGTTCAACAAATAACCGG TGCAACAAACAATATGCAACGGCGTGCTGGAAATATGTTACCTCCACCAC TGGATGATTATTGCCCCAACAGTTCTGCATCTGCAGCAAAACCTATTGCT AAAAATGCTCCAAATAATACAACAGTGAGCATTCCTAAAGGTTCTCCTCC AAATGGAAGCTCTGTTAGATCTATTGCTCTTCCTGCTGGAGCATCATGGG GAATGCGTGCCTTAAACCATCCACAAACAGCTGGTTTAGCATGTTCAAAT GGACCTTCTAAGCAGAAATCTGATATGGTTAGCAGCACATTACCATTTTC ATCTGCTGTGGCAAACACAAATCAGGTTTCTACATTACATGGTGATGTTA TAAAGAAGCCATCTGAGGAAATTCATGCTATGCATATGATGGGTAAACCT GATTTGTTAAAACCTTTAAAAGAAAATGCCAGTTTAGATTGTCGAACTAC TCCACTAGAGAAACCTCCTTCACCTGATGTAGTTTCTGCTTCTAAATCAT TGAGCAGCCAGTTATCTTGTCCACCACCATCCAATTATAATGACCAGTGC ACTAATATACCATCAAATGTTACAAGCTCCACCTTTGACCATGCTGAGCA GTCTTTTATTTCCCCCAGTGAAAAAGAGGGGAATATTTCCTCTACTGATG GAAAGATACAGAGCTTGTGCTCGGATATGTCAGCACTGACCTTAGATAGG AATGTCTTGAATGGACTTTCCAGTTTAGTTAGACCAAGCAGTTCAGCTTC CGATCATGGATCAAGCAGCTCACCTGGTAGTCAGGGGTTACAACAACGTT ATATTGATCACTATCGAGAACCTTTAAGTTCACCAGCTGCTGGGAGAGCT GTGACATCTCCCAATGGGGTGTGTATTTCAAAAGAGCAGTCTGATTGGAG AACTGATATGCAAACTCAAGCAGTGGCAAATACAAGTTCTGAAGTAGAGG AAGACATATTGTCTTTTGATAATCAAAGACTCAAGGATCCTGAAGTCATT AGCCGTTCAAGTTATGTGCCAAATTCACCAAGTTCGCTCCATTTATCAAA TCATTCTGGGTCCCATTCTTTGCATCGTAATGAAGGTTTAGGTGCCATTA ATTTGAATGCTGATACTCTCTTTGTAGATAATAAACTTAGTGAGAGTCTA CGTTTTCATGGATCTAGTGTTTCTTCTTTATCAAATGGATACCCTGAGAA GTACATAAGCAGTAGTAGTATTGGTTCTGATATTATCACAGAAGGCTCCC TTCTGCTTCCAAATGAAGGGAAAGGGAAGAAGATGGGAAGATTCCTTGGT AATGCTGGGAGCGATGCTGCTAAAGATACAGGAGAGAGCAGCATAATCTC AAACATATTGTCGCTAGATTTGGATACATGGGATGAGTCCCTAGCCTCAC CTCAGAACTTGGCTAAGTTGTTTGGTGACACTGACAAGCAGCCCAGTTCT CTCAAATTATCTAGTTCCTGGAAAGGACAGAATAACAATCAGTCCAGATT CTCCTTTGCGAGACAGGAGGATTCTAAATATCATCCATTTGATGTTGAGT CCTCATTTAGTGTCTTTGGGCAAATGCCAAGGAACCGCTCTTCCAGCCAA GATTTTGCAGAAAGCAGGGATCTCTATCTAAATAAGTTTGGAATTTCTAA TGGTTTTTCTTCCGGTAACTTTGAGGAATCTGACAATTTTACCAGCAGTC CTTCAGTTTTCTCTTCTAATAAGCTTTCTGCAGTGTCAAGAGCTCAAATT TCAGCCCCACCTGGATTCTCTGTTCCTAGCAGGGCACCACCTCCAGGCTT TTCTTCTCATGAGAGAGTAGACCATGGTTTTGACACAACATCTGGAATTC ATTTGATGGACAATTCCTCCCTGTTAAGAAATTCTTATCAGGCTCCGGCA AGTGGTGGTATTGGTGGCTCTGGGGATATAGAATTTGTGGATCCAGCAAT TTTGGCAGTTGGTAAGGGTAGTCTTCAGGGAGGGCTTAACAATTCAGGCT TAGACATGAGATCAAATTTTCCACCACAGTTAGGTCCCTATGAAAACGAG GCCAGATTTCAACTATTGATGCAGAGATCTCTTTCTCCTCATCAGAACCT AAGATATGATGTCGGGGATAGCTTTTCTTCTCTTAGTGACTCTTATGGAA TTTCTTCCAGGCTAATCGATCAATCCCAGGTGAACAATATGTCCCCATTT GCACAGTTGTCTCTTCAACAGTCAAGGAATTCACACATGTCAAATGGTCA TTGGGATGGATGGAATGAGGTTCAGGGTGGAAACAGTCTCGGTGTGGCAG AGCTCCTCAGAAATGATAGATTGGGATATAACAAGTTTTATTCCAGTTAT GAAGGTTCAAAGTACAGGATGCCCACTTCGGGGGATCTGTATAACAGAAC ATTCGGGATGTGA back to topprotein sequence of Tc09v2_p028280.1 >Tc09v2_p028280.1 ID=Tc09v2_p028280.1|Name=Tc09v2_p028280.1|organism=Theobroma cacao|type=polypeptide|length=1021bp
MSDEGEKTCPLCEEDMDLTDQQLKPCKCGYEICVWCWHHIMDMAEKDETE GRCPACRSAYDKERIVGMAANCERLVAEINMERKMKSQKAKTKSSEGRKQ LSSVRVIQRNLVYIVGLPLNLADEDLLQQREYFGQYGKVLKVSMSRTAAG VIQQFPNNTCSVACFGTTKYCHAWLRNVPCSNPDCLYLHEIGSQEDSFTK DEIISAYTRSRVQQITGATNNMQRRAGNMLPPPLDDYCPNSSASAAKPIA KNAPNNTTVSIPKGSPPNGSSVRSIALPAGASWGMRALNHPQTAGLACSN GPSKQKSDMVSSTLPFSSAVANTNQVSTLHGDVIKKPSEEIHAMHMMGKP DLLKPLKENASLDCRTTPLEKPPSPDVVSASKSLSSQLSCPPPSNYNDQC TNIPSNVTSSTFDHAEQSFISPSEKEGNISSTDGKIQSLCSDMSALTLDR NVLNGLSSLVRPSSSASDHGSSSSPGSQGLQQRYIDHYREPLSSPAAGRA VTSPNGVCISKEQSDWRTDMQTQAVANTSSEVEEDILSFDNQRLKDPEVI SRSSYVPNSPSSLHLSNHSGSHSLHRNEGLGAINLNADTLFVDNKLSESL RFHGSSVSSLSNGYPEKYISSSSIGSDIITEGSLLLPNEGKGKKMGRFLG NAGSDAAKDTGESSIISNILSLDLDTWDESLASPQNLAKLFGDTDKQPSS LKLSSSWKGQNNNQSRFSFARQEDSKYHPFDVESSFSVFGQMPRNRSSSQ DFAESRDLYLNKFGISNGFSSGNFEESDNFTSSPSVFSSNKLSAVSRAQI SAPPGFSVPSRAPPPGFSSHERVDHGFDTTSGIHLMDNSSLLRNSYQAPA SGGIGGSGDIEFVDPAILAVGKGSLQGGLNNSGLDMRSNFPPQLGPYENE ARFQLLMQRSLSPHQNLRYDVGDSFSSLSDSYGISSRLIDQSQVNNMSPF AQLSLQQSRNSHMSNGHWDGWNEVQGGNSLGVAELLRNDRLGYNKFYSSY EGSKYRMPTSGDLYNRTFGM* back to top
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