Tc09v2_t026470.7

Overview
NameTc09v2_t026470.7
Unique NameTc09v2_t026470.7
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length690
Properties
Property NameValue
NoteNAD(P)-binding Rossmann-fold superfamily protein isoform 2
Model evidenceSupporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
Producttropinone reductase homolog At2g29290, transcript variant X8
Cross References
External references for this mRNA
DatabaseAccession
GeneID18590629
GenbankXM_018127028.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc09v2_g026470Tc09v2_g026470Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc09v2_p026470.7Tc09v2_p026470.7Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto476314auto476314Theobroma cacaoexon
exon-auto476315auto476315Theobroma cacaoexon
exon-auto476316auto476316Theobroma cacaoexon
exon-auto476317auto476317Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto476318auto476318Theobroma cacaoCDS
CDS-auto476319auto476319Theobroma cacaoCDS
CDS-auto476320auto476320Theobroma cacaoCDS
CDS-auto476321auto476321Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc09v2_t026470.7 ID=Tc09v2_t026470.7|Name=Tc09v2_t026470.7|organism=Theobroma cacao|type=mRNA|length=690bp
ATGGCTCAAGCAGATAACTCTAGGAAGGACAACAGATGGAGTCTTCAAGG
CATGACTGCACTTGTTACTGGTGGAACCAAAGGAATCGGGCATGCTATCA
TAGAGGAATTAGCTGGACTGAGAGCAAGAATACACACATGCTCCCGGACT
GAAACTGACCTCAACAAATGCTTACTTGACTGGGCAGCGAAGGGTTTCCA
GGTTACTGGTTCAGTCTGTGATGTATCATCGCAGGCCCAAAGAGAGAAGC
TAATAAACACTGTCTCCTCTGAATTTGGAGGAAAACTCAACATCCTGGTT
AACAATGTGGGGACAGCTATTTTAAAGCCGACTCCAGACTTCACCACTGA
AGATTTCTCATTTATGATGGGGACCAATTTTGAGTCTGCTTACAACTTGT
GCCAACTTGCCTATCCTCTTTTGAAAGCTTCAGGTGCAGGAAGCATTGTT
TTTCTCTCTTCAATTGCTGGTGTGGTATCTGTAAGTTTTGGATCTTTATA
TGGAGCAACAAAAGTACATTCAAAAGTTTTCAGAGAATATCATCTCTCGA
ACTCCAATGGGACGCATTGGAGAGCCAGAGGAAGTGTCATCCTTGGTGGG
ATTCCTGTGTCTACCAGCATCCTCTTATATAACAGGGCAGACTTTTTGCA
TCGATGGGGGCATGTCAGTGAATGCCTTCTTCTACCATGA
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protein sequence of Tc09v2_p026470.7

>Tc09v2_p026470.7 ID=Tc09v2_p026470.7|Name=Tc09v2_p026470.7|organism=Theobroma cacao|type=polypeptide|length=230bp
MAQADNSRKDNRWSLQGMTALVTGGTKGIGHAIIEELAGLRARIHTCSRT
ETDLNKCLLDWAAKGFQVTGSVCDVSSQAQREKLINTVSSEFGGKLNILV
NNVGTAILKPTPDFTTEDFSFMMGTNFESAYNLCQLAYPLLKASGAGSIV
FLSSIAGVVSVSFGSLYGATKVHSKVFREYHLSNSNGTHWRARGSVILGG
IPVSTSILLYNRADFLHRWGHVSECLLLP*
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