Tc09v2_t026470.6

Overview
NameTc09v2_t026470.6
Unique NameTc09v2_t026470.6
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length699
Properties
Property NameValue
NoteTropinone reductase homolog At1g07440
Model evidenceSupporting evidence includes similarity to: 1 EST, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
Producttropinone reductase homolog At2g29290, transcript variant X7
Cross References
External references for this mRNA
DatabaseAccession
GeneID18590629
GenbankXM_018127027.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc09v2_g026470Tc09v2_g026470Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc09v2_p026470.6Tc09v2_p026470.6Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto476304auto476304Theobroma cacaoexon
exon-auto476305auto476305Theobroma cacaoexon
exon-auto476306auto476306Theobroma cacaoexon
exon-auto476307auto476307Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto476308auto476308Theobroma cacaoCDS
CDS-auto476309auto476309Theobroma cacaoCDS
CDS-auto476310auto476310Theobroma cacaoCDS
CDS-auto476311auto476311Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc09v2_t026470.6 ID=Tc09v2_t026470.6|Name=Tc09v2_t026470.6|organism=Theobroma cacao|type=mRNA|length=699bp
ATGGCTCAAGCAGATAGCTCTAGGAAGGACAACAGATGGAGTCTTCAAGG
CATGACTGCACTTGTTACTGGTGGAACCAAAGGAATCGGGTATGCTATCG
TAGAGGAATTAGCTGCACTGGGAGCAAGAACACACACGTGCTCACGAAAT
AAAACTGACCTCAACAAATGCCTACTTGACTGGGAAGCAAAGGGTTTCCA
GGTTACTGGTTCAGTCTGTGATGTATCATCTCAGGCCCAAAGAGAGAAGC
TAATAAACACTATCTCCTCTGAATTTGGTGGAAAACTCAACATCCTGATT
AACAATGTGGGAACACTTATTTCAAAGCCGACTCCAGACTTCACTGCTGA
AGATTTCTCATTGATCATGGGCACCAATTTTGAGTCTGCTTACAACTTGT
GCCAACTTGCATACCCTCTTCTGAAAGCTTCAGGGGCAGGAAGCATCGTT
TTTCTCTCTTTAGTTGTTGGTGTGGTATCATACATTCAAAAGTTTTCAGA
GACTATCATCTCTCGAACTCCGATGGGACGAATTGGAGAGCCAGAGGAAG
TGTCATCCTTGGTGGGATTCCTGTGCCTACCAGCATCCTCTTATATAACA
GGGCAGACTTTTTGCATCGATGGGGGCATGTCAGTGAATGGCTTCTTCTG
CCATAAAACCTTACTAGGGAAGAATAGCCAGGCTAATTCCCAATCTTGA
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protein sequence of Tc09v2_p026470.6

>Tc09v2_p026470.6 ID=Tc09v2_p026470.6|Name=Tc09v2_p026470.6|organism=Theobroma cacao|type=polypeptide|length=233bp
MAQADSSRKDNRWSLQGMTALVTGGTKGIGYAIVEELAALGARTHTCSRN
KTDLNKCLLDWEAKGFQVTGSVCDVSSQAQREKLINTISSEFGGKLNILI
NNVGTLISKPTPDFTAEDFSLIMGTNFESAYNLCQLAYPLLKASGAGSIV
FLSLVVGVVSYIQKFSETIISRTPMGRIGEPEEVSSLVGFLCLPASSYIT
GQTFCIDGGMSVNGFFCHKTLLGKNSQANSQS*
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