Tc09v2_t026470.4

Overview
NameTc09v2_t026470.4
Unique NameTc09v2_t026470.4
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length702
Properties
Property NameValue
NoteNAD(P)-binding Rossmann-fold superfamily protein isoform 2
Model evidenceSupporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
Producttropinone reductase homolog At2g29290, transcript variant X6
Cross References
External references for this mRNA
DatabaseAccession
GeneID18590629
GenbankXM_018127026.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc09v2_g026470Tc09v2_g026470Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc09v2_p026470.4Tc09v2_p026470.4Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto476280auto476280Theobroma cacaoexon
exon-auto476281auto476281Theobroma cacaoexon
exon-auto476282auto476282Theobroma cacaoexon
exon-auto476283auto476283Theobroma cacaoexon
exon-auto476284auto476284Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto476285auto476285Theobroma cacaoCDS
CDS-auto476286auto476286Theobroma cacaoCDS
CDS-auto476287auto476287Theobroma cacaoCDS
CDS-auto476288auto476288Theobroma cacaoCDS
CDS-auto476289auto476289Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc09v2_t026470.4 ID=Tc09v2_t026470.4|Name=Tc09v2_t026470.4|organism=Theobroma cacao|type=mRNA|length=702bp
ATGGAGTCTTCAAGGCATGACTGCACTTGTTACTGGTGGAACCAAAGGAA
TCGGAACGATACATTCATGAATATAACAAAGCATCCAGTGGATTGCGCAA
GGTATGCTATCGTAGAGGAATTAGCTGCACTGGGAGCAAGAACACACACG
TGCTCACGAAATAAAACTGACCTCAACAAATGCCTACTTGACTGGGAAGC
AAAGGGTTTCCAGGTTACTGGTTCAGTCTGTGATGTATCATCTCAGGCCC
AAAGAGAGAAGCTAATAAACACTATCTCCTCTGAATTTGGTGGAAAACTC
AACATCCTGATTAACAATGTGGGAACACTTATTTCAAAGCCGACTCCAGA
CTTCACTGCTGAAGATTTCTCATTGATCATGGGCACCAATTTTGAGTCTG
CTTACAACTTGTGCCAACTTGCATACCCTCTTCTGAAAGCTTCAGGGGCA
GGAAGCATCGTTTTTCTCTCTTTAGTTGTTGGTGTGGTATCAGTAAGTTG
TGGATCTTTATATGTAGCAACAAAAGTACATTCAAAAGTTTTCAGAGACT
ATCATCTCTCGAACTCCGATGGGACGAATTGGAGAGCCAGAGGAAGTGTC
ATCCTTGGTGGGATTCCTGTGCCTACCAGCATCCTCTTATATAACAGGGC
AGACTTTTTGCATCGATGGGGGCATGTCAGTGAATGGCTTCTTCTGCCAT
AA
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protein sequence of Tc09v2_p026470.4

>Tc09v2_p026470.4 ID=Tc09v2_p026470.4|Name=Tc09v2_p026470.4|organism=Theobroma cacao|type=polypeptide|length=234bp
MESSRHDCTCYWWNQRNRNDTFMNITKHPVDCARYAIVEELAALGARTHT
CSRNKTDLNKCLLDWEAKGFQVTGSVCDVSSQAQREKLINTISSEFGGKL
NILINNVGTLISKPTPDFTAEDFSLIMGTNFESAYNLCQLAYPLLKASGA
GSIVFLSLVVGVVSVSCGSLYVATKVHSKVFRDYHLSNSDGTNWRARGSV
ILGGIPVPTSILLYNRADFLHRWGHVSEWLLLP*
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