Tc09v2_t026440.1

Overview
NameTc09v2_t026440.1
Unique NameTc09v2_t026440.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length816
Properties
Property NameValue
NoteTropinone reductase homolog At2g29150
Model evidenceSupporting evidence includes similarity to: 45 ESTs, 84 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
Producttropinone reductase homolog At2g29290, transcript variant X1
Cross References
External references for this mRNA
DatabaseAccession
GeneID18590625
GenbankXM_007016259.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc09v2_g026440Tc09v2_g026440Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc09v2_p026440.1Tc09v2_p026440.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto476198auto476198Theobroma cacaoexon
exon-auto476199auto476199Theobroma cacaoexon
exon-auto476200auto476200Theobroma cacaoexon
exon-auto476201auto476201Theobroma cacaoexon
exon-auto476202auto476202Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto476203auto476203Theobroma cacaoCDS
CDS-auto476204auto476204Theobroma cacaoCDS
CDS-auto476205auto476205Theobroma cacaoCDS
CDS-auto476206auto476206Theobroma cacaoCDS
CDS-auto476207auto476207Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc09v2_t026440.1 ID=Tc09v2_t026440.1|Name=Tc09v2_t026440.1|organism=Theobroma cacao|type=mRNA|length=816bp
ATGGCTGAAGCAGATAGCTCTAGCAAGGATAACAGATGGAGTCTGCATGG
CATGACTGCCCTTGTTACTGGTGGAACCAAAGGAATCGGGCATGCTATCG
TAGAGGAACTAGCGGGACTAGGAGCAAGAATTCATACATGCTCCCGAACC
GAAACCGAGCTCAACAAGTGCTTACTTGAATGGCAAGCAAAGGGCTTCCA
AGTTACTGGTTCAGCCTGTGATGTTTCGTCTAAGGCCCAAGGGGAAAAGC
TAATTAACACTGCCTCCTCTGTATTCAACGGGAAACTTGACATCCTGATA
AACAATGTGGGAACCATTGTTGCAAAGCCGATTTCAGAGGAAACGGCTGA
AGAAGTTTCATTTCTCATGGGTACCAATTTTGAATCAGCTCATAACTTGA
GCCTACTTGCACATCCTCTTCTGAAAGCTTCAGGGGCAGGAAGCATTGTG
CTTCTCTCTTCAATTGCTGGCCTAACACCAGTAAGAACTTTGCCTACATA
TGGAGCAACCAAAGGGGCCATGAACCAGCTTGCAAAACACCTTGCATGTG
AGTGGGCGGGAGATAATATTAGGGTCAACGCTGTTGCACCTTCACTGATC
AGAACTCCCCTTGCTGAACCTGTTTTTCATGATGAAAAAGCACTTGAGGC
TTTCATCACTAAGATTCCGATGGGACGCGCCGGAGAGCCAAAGGAAGTCT
CGTCATTGGTGGCATTTCTCTGCCTGCCTGCAGCTTCTTATATAACAGGG
CAGATTATTTACGTTGATGGAGGGATCACACTGAACGGCCTCTTCTTCCC
ATCAAACATAGCTTGA
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protein sequence of Tc09v2_p026440.1

>Tc09v2_p026440.1 ID=Tc09v2_p026440.1|Name=Tc09v2_p026440.1|organism=Theobroma cacao|type=polypeptide|length=272bp
MAEADSSSKDNRWSLHGMTALVTGGTKGIGHAIVEELAGLGARIHTCSRT
ETELNKCLLEWQAKGFQVTGSACDVSSKAQGEKLINTASSVFNGKLDILI
NNVGTIVAKPISEETAEEVSFLMGTNFESAHNLSLLAHPLLKASGAGSIV
LLSSIAGLTPVRTLPTYGATKGAMNQLAKHLACEWAGDNIRVNAVAPSLI
RTPLAEPVFHDEKALEAFITKIPMGRAGEPKEVSSLVAFLCLPAASYITG
QIIYVDGGITLNGLFFPSNIA*
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