Tc09v2_t026380.1

Overview
NameTc09v2_t026380.1
Unique NameTc09v2_t026380.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length810
Properties
Property NameValue
NoteMethylsterol monooxygenase 2-2
Model evidenceSupporting evidence includes similarity to: 8 ESTs, 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
Productmethylsterol monooxygenase 2-2
Cross References
External references for this mRNA
DatabaseAccession
GeneID18590619
GenbankXM_007016247.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc09v2_g026380Tc09v2_g026380Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc09v2_p026380.1Tc09v2_p026380.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto476130auto476130Theobroma cacaoexon
exon-auto476131auto476131Theobroma cacaoexon
exon-auto476132auto476132Theobroma cacaoexon
exon-auto476133auto476133Theobroma cacaoexon
exon-auto476134auto476134Theobroma cacaoexon
exon-auto476135auto476135Theobroma cacaoexon
exon-auto476136auto476136Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto476137auto476137Theobroma cacaoCDS
CDS-auto476138auto476138Theobroma cacaoCDS
CDS-auto476139auto476139Theobroma cacaoCDS
CDS-auto476140auto476140Theobroma cacaoCDS
CDS-auto476141auto476141Theobroma cacaoCDS
CDS-auto476142auto476142Theobroma cacaoCDS
CDS-auto476143auto476143Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc09v2_t026380.1 ID=Tc09v2_t026380.1|Name=Tc09v2_t026380.1|organism=Theobroma cacao|type=mRNA|length=810bp
ATGGCTTCTGTTATTGAATCTGGCTGGCTGTATCTGATCACACATTTCAG
TGACTTCCAACTAGCAAGTCTGGGAAGTTTCTTTCTTCATGAAAGTGTTT
TTTTCCTAGCTGGACTTCCATTTATATATCTGGAAAGAGCTGGATTGCTG
AGCAAATACAAGATTCAGACAAAAAACAACAGCCCTGCTGCTCAGGAAAA
ATGTATCACCCGCCTGCTTCTGTATCATTTTTGTGTCAACTTACCACTTA
TGAGTGCCTCTTATCCTGTTTTTAGATTCATGGGCATGAAAAGTAGTCTA
CCATTGCCATCCTGGAAAGTGGTTCTATCACAGATAATATTCTACTTCAT
CCTTGAGGATTTCGTGTTTTACTGGGGACATCGAATTTTACATACAAAAT
GGCTCTACAAGCATGTGCACAGTGTCCATCATGAATATGCTACACCATTT
GGACTGACATCTGAGTATGCTCACCCTGCTGAGATATTGTTCCTCGGGTT
TGCAACAATTGTTGGTCCTGCCATCACTGGCCCACATCTGATCACTCTCT
GGTTGTGGATGGTCCTTAGAGTCCTAGAGACAGTTGAGGCACATTGTGGT
TACCATTTTCCATGGAGCCTCTCAAACTTTTTACCTTTATATGGGGGTGC
TGATTTTCATGACTATCATCACCGTTTGCTTTATACGAAATCTGGCAACT
ACTCTTCTACATTTGTTTACATGGACTGGATATTTGGTACTGATAAGGGC
TACAGAAAATTGAAAGCACTAAAGCATGATGGAGTTGAAGATGACAGCAA
GCAAACATAA
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protein sequence of Tc09v2_p026380.1

>Tc09v2_p026380.1 ID=Tc09v2_p026380.1|Name=Tc09v2_p026380.1|organism=Theobroma cacao|type=polypeptide|length=270bp
MASVIESGWLYLITHFSDFQLASLGSFFLHESVFFLAGLPFIYLERAGLL
SKYKIQTKNNSPAAQEKCITRLLLYHFCVNLPLMSASYPVFRFMGMKSSL
PLPSWKVVLSQIIFYFILEDFVFYWGHRILHTKWLYKHVHSVHHEYATPF
GLTSEYAHPAEILFLGFATIVGPAITGPHLITLWLWMVLRVLETVEAHCG
YHFPWSLSNFLPLYGGADFHDYHHRLLYTKSGNYSSTFVYMDWIFGTDKG
YRKLKALKHDGVEDDSKQT*
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