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Properties
Property Name | Value |
Note | DExH-box ATP-dependent RNA helicase DExH11 |
Model evidence | Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns |
Product | DExH-box ATP-dependent RNA helicase DExH11, transcript variant X1 |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Tc09v2_t025740.3 ID=Tc09v2_t025740.3|Name=Tc09v2_t025740.3|organism=Theobroma cacao|type=mRNA|length=4038bp ATGAAACCGATCCAAGCAGCAAACGGATTCAGTTTCCGAGTCGGATTCTC CGGCCACAGCGGCCACCTCAGAGTCGAGCCTCTCTACACCGAGGAGCGCG ATAACCCTATTAAAACTCTCCCCGACTTTGTTCTCCCACCTGCATTTCCC AGGGAAACACCGGAATCGATTAAGGAACATATAAAGGAGAAATATCTTTT GCCAAGATTGGACGATGAAGCTTTTTCTCCAGAAAAAGCTGGAAGGCAAT GGGATTTTGACTGGTTTGAAAGGGTAAAAATACCATTGGAGCCATCATTG CCAAGAACTGTTATGGTTCCAGTCTGGGAGTTACCCTTCAGACGGTGCAA AGGGGGATCAGTTGAAGGAAAGTGGGAACCTAATTCATTGCAGGTGGATG TATCAGAACTAATAGTTGGGGGTCAAGCTTCTGGTTCTTTTCCACACACG GTTGGTGGTGCTGCCAAGGATTTTGTAAGAGGAAGCATTAATAACCGACC TTTTCGTCCAGGAGGCTTGGAGGATCAATCTGTAGAGAGGATTCTTCCGG ATGGTGCATGTAATGGTGAGTGGGTTAGTGAGGTGCTAAATGGTGGTCCT GTTCAAACAATTCCTCCAGGCTTTAAGCAAGGGTTAAACCTTGGTGATCT TACGGCACATCCTTGCTTATGGAATGTTTACAAGGACCGAATTTCACTCA ATAACACATCAGTTGAAAAGGTGAGTGAGTTGTCTGTACAATTTGACGAC TTGTTCAAGAAAGCTTGGGAAGAGGATGTTACAGAATTTGAGAAAGATGG GCATTCAACAGAATCAGATTCTGTTAAGTCAGAAGCTGAGGCGAACCAGG CTGATGTTCTCAACAGTCTTGATACTGGATCATCTGCTTTGGATGAAATT TTATCAGTTGAAGCAGAAAGATTAGATGAGAAAAGTGATGGGGGTGGTCA GCAACAAAAGGAGGCTTGGGCTGTTAGTGGAGGTAGTGAAGGGATTGCTG ATCACTTTTACGAACTAGTTCCTGACATGGCAATTGAATATCCTTTTGAA TTGGATACATTCCAGAAGGAGGCTATTTATTATTTGGAAAAGGGGGAGTC TGTTTTTGTGGCGGCTCATACATCTGCTGGAAAAACAGTTGTTGCAGAAT ATGCATTTGCTTTGGCGTCAAAACATTGCACTAGAGCTGTGTATACAGCT CCAATTAAAACAATCAGCAATCAGAAGTATAGAGATTTCTGTGGGAAATT TGATGTTGGTCTTCTTACTGGTGATGTTAGTTTGAGACCTGAGGCTTCTT GTCTCATCATGACGACTGAAATATTAAGGTCAATGCTTTATCGGGGTGCG GATATTATTCGCGATATTGAATGGGTTATATTTGATGAGGTGCACTACGT GAATGATGTTGAAAGAGGCGTGGTTTGGGAAGAGGTCATAATCATGCTTC CAAAACATATTAACATCATCCTCCTTTCAGCCACGGTGCCGAATACAATT GAATTTGCTGATTGGATTGGTCGGACGAAGCAAAAAAAAATTCGTGTCAC TGGGACAACAAAAAGACCAGTCCCACTGGAGCATTGCCTGTTTTATTCTG GAGAACTTTACAAAATATGTGAAAGTGAAACTTTTATATCATTGGGACTA AAGGCTGCCAAAGATGCATACAAGAAAAAGAATTCCAATGCAATTAGTGG TGGTACTGCTTCGTATACTGGTTCTTCTGCAGTTCATGATGGGGCTCGAG GTCAGAAACGTGAAATTTCTAACCGAGGGAAACAAAATAAGCATTCTGGT CCACAAAATTTGGGGCACTATTCTGGGACAGGTTGGGGGAATCAAGGCAG TGGAGGTGGCCAGAATAGTTGGGGATCTAGGAGATCAGCATGGTTGATGC TTATTGACAAGCTTTCAAAGCAGTCACTATTACCTGTGGTTATATTTGGT TTCTCAAAGAACCAATGTGATAAATCAGCTGACAGCATCTCTGGGACTGA CCTCACTAGTAGTTCTGAGAAAAGTGAGATCCGTGTTTTTTGTGATAAAG CTTTTTCACGGCTTAAGGGATCTGATCGCAATTTACCTCAGGTTGTCAGA GTTCAGAACCTTCTTTGCAGAGGAATTGGTGTGCATCATGCAGGTTTGCT TCCAATTGTCAAGGAAGTTGTTGAAATGCTCTTCTGTCGAGGTGTGATTA AGGTTTTGTTTTCAACAGAGACATTTGCCATGGGTGTTAATGCTCCAGCC AGAACGGTTGTCTTTGATACATTAAGGAAGTTTGATGGCAAGGAATTTAG ACAGTTACTCCCTGGGGAATACACTCAAATGGCAGGTCGTGCTGGCAGAA GAGGACTTGATAAAACTGGTACAGTTATTGTGATGTGCCGTGATGAAATC CCAGAAGAGAGGGATTTGAAACATGTTATAACTGGAACTCCAACTAATCT CGAATCTCAGTTCCGATTGACATACATTATGATCCTACATCTTCTTCGTG TGGAAGAACTGAAGGTGGAGGACATGTTGAAACGGAGTTTTTCTGAATTT CATGCTCAGAAGAAACTTCCAGAGCAGCAACAACGTCTATTGCGAAAGCT TGCACAGCCAAAGAAAACTATAGAATGTATTAAAGGTGAACCTGCAATTG AAGAGTACTATGAGATGCATGCAGAAGCCGAGGAACACTACCGACAGATA TCAAATGCTGTCATGCAGTCTCCTGTTGCCCAACAATTTCTTACTGTTGG GAGAGTGGTTGTGGTGAAATCTCAGTCAGCCCACGACCATTTACTTGGAG TTGTCGTAAAATCACCTTCTGCCAATAACAAACAATATATTGTGCAAGTT CTTAAACCTGATGTGCCATTAATGACTCAAACTCCCTCAAGCAGCAGTAA CTTGCAAGATAAGAGAAGTGCTGACTTCCAACAAGGTTATGTGCTGCTAC CAAAAGCTAAACGTGGTCTCGAAGAAGACTACCGCTTATCTACTGGTCCA CGCAAAGGATCAGGTATCATCAACATAAAACTGCCTCACCATGGTGCTGC TGCAGGAGTGAGTTTTGAGGTCAGAGAAACTGATAATACAGAATTCTTAT GCATATGCAATAGCAAGATAAAAGTCGAGCAAGTTGGGATTCTTGAATAT GGTAGCGATACTGCTTTCTCTAACGCAGTTCAGCAGCTGTTGAAATTGAA ATCTAATGGAAACAAATATCCTCCAGCCTTAGATCCAATTAAAGATCTCA AATTGAAAGACATGGATCTTGTTCAAAAATACTACAAGTGGACCCACCTA CTGCAAAAAATGTCAGAGAACAAATGCCACGAATGTATTAAGTTGGAGGA GCACATTAAGCTAGCTAGAGAGATTAAGAAGCATAAAGATGAAGTTAATG CTCTTGAATTTCAATTGTCTAATGAAGCGCTCCAACAGATGCCAGAATTT CAGGGCCGGATTGATGTTCTGAAGGAAATTGGTTGTATAGATGAAGACCA TGTGGTTCAATTAAAAGGTCGTGTTGCCTGTGAGATGAATTCAGGGGAGG AATTGATATGCACAGAATGTTTATTTGAGAATCAACTAGATGACCTGGAA CCTGAAGAAGCGGTGGCTTTAATGTCGGCCTTCGTCTTTCAGCAGAAGAA CACTTCTGAACCTTCTCTTACATCAAAACTCTCTCAGGCCAAAAAAAGAT TGTATGACACAGCTATAAAACTTGGTAATCTTCAAGCAGGGTTCAAATTA CAAATAACACCTGAGGAGTATGCGAAAGAAAATCTCAAGTTTGGTCTTGT TGAAGTGGTGTACGAATGGGCAAAGGGAACTCCATTTGCAGAAATTTGTG AGCTCACGGATGTTCCTGAAGGCCTTATAGTGCGGACAATTGTCAGGCTG GACGAGACTTGTCGTGAATTTAAAAGTGCTGCAGCTATAATGGGTAATTC ATCACTTTATAAGAAAATGGAATCTGCTTCCAATGCCATAAAGCGTGATA TCGTCTTTGCTGCTAGTTTGTACATTACAGGAGTGTGA back to topprotein sequence of Tc09v2_p025740.3 >Tc09v2_p025740.3 ID=Tc09v2_p025740.3|Name=Tc09v2_p025740.3|organism=Theobroma cacao|type=polypeptide|length=1346bp
MKPIQAANGFSFRVGFSGHSGHLRVEPLYTEERDNPIKTLPDFVLPPAFP RETPESIKEHIKEKYLLPRLDDEAFSPEKAGRQWDFDWFERVKIPLEPSL PRTVMVPVWELPFRRCKGGSVEGKWEPNSLQVDVSELIVGGQASGSFPHT VGGAAKDFVRGSINNRPFRPGGLEDQSVERILPDGACNGEWVSEVLNGGP VQTIPPGFKQGLNLGDLTAHPCLWNVYKDRISLNNTSVEKVSELSVQFDD LFKKAWEEDVTEFEKDGHSTESDSVKSEAEANQADVLNSLDTGSSALDEI LSVEAERLDEKSDGGGQQQKEAWAVSGGSEGIADHFYELVPDMAIEYPFE LDTFQKEAIYYLEKGESVFVAAHTSAGKTVVAEYAFALASKHCTRAVYTA PIKTISNQKYRDFCGKFDVGLLTGDVSLRPEASCLIMTTEILRSMLYRGA DIIRDIEWVIFDEVHYVNDVERGVVWEEVIIMLPKHINIILLSATVPNTI EFADWIGRTKQKKIRVTGTTKRPVPLEHCLFYSGELYKICESETFISLGL KAAKDAYKKKNSNAISGGTASYTGSSAVHDGARGQKREISNRGKQNKHSG PQNLGHYSGTGWGNQGSGGGQNSWGSRRSAWLMLIDKLSKQSLLPVVIFG FSKNQCDKSADSISGTDLTSSSEKSEIRVFCDKAFSRLKGSDRNLPQVVR VQNLLCRGIGVHHAGLLPIVKEVVEMLFCRGVIKVLFSTETFAMGVNAPA RTVVFDTLRKFDGKEFRQLLPGEYTQMAGRAGRRGLDKTGTVIVMCRDEI PEERDLKHVITGTPTNLESQFRLTYIMILHLLRVEELKVEDMLKRSFSEF HAQKKLPEQQQRLLRKLAQPKKTIECIKGEPAIEEYYEMHAEAEEHYRQI SNAVMQSPVAQQFLTVGRVVVVKSQSAHDHLLGVVVKSPSANNKQYIVQV LKPDVPLMTQTPSSSSNLQDKRSADFQQGYVLLPKAKRGLEEDYRLSTGP RKGSGIINIKLPHHGAAAGVSFEVRETDNTEFLCICNSKIKVEQVGILEY GSDTAFSNAVQQLLKLKSNGNKYPPALDPIKDLKLKDMDLVQKYYKWTHL LQKMSENKCHECIKLEEHIKLAREIKKHKDEVNALEFQLSNEALQQMPEF QGRIDVLKEIGCIDEDHVVQLKGRVACEMNSGEELICTECLFENQLDDLE PEEAVALMSAFVFQQKNTSEPSLTSKLSQAKKRLYDTAIKLGNLQAGFKL QITPEEYAKENLKFGLVEVVYEWAKGTPFAEICELTDVPEGLIVRTIVRL DETCREFKSAAAIMGNSSLYKKMESASNAIKRDIVFAASLYITGV* back to top
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