Tc09v2_t023970.1

Overview
NameTc09v2_t023970.1
Unique NameTc09v2_t023970.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length438
Properties
Property NameValue
NoteCucumisin protein
Model evidenceSupporting evidence includes similarity to: 1 EST, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
Producthistidine-containing phosphotransfer protein 2-like, transcript variant X3
Cross References
External references for this mRNA
DatabaseAccession
GeneID108663169
GenbankXM_018126551.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc09v2_g023970Tc09v2_g023970Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc09v2_p023970.1Tc09v2_p023970.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto471099auto471099Theobroma cacaoexon
exon-auto471100auto471100Theobroma cacaoexon
exon-auto471101auto471101Theobroma cacaoexon
exon-auto471102auto471102Theobroma cacaoexon
exon-auto471103auto471103Theobroma cacaoexon
exon-auto471104auto471104Theobroma cacaoexon
exon-auto471105auto471105Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto471106auto471106Theobroma cacaoCDS
CDS-auto471107auto471107Theobroma cacaoCDS
CDS-auto471108auto471108Theobroma cacaoCDS
CDS-auto471109auto471109Theobroma cacaoCDS
CDS-auto471110auto471110Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc09v2_t023970.1 ID=Tc09v2_t023970.1|Name=Tc09v2_t023970.1|organism=Theobroma cacao|type=mRNA|length=438bp
ATGGTTGGAAGGGCTGATCATTTTGTGCAGTTGATCAATACATACTGCCT
CAATGTGGAAACCATTTTATCAAAACTTGAAAGCTACATTGATCTCCCTA
ATGTTGATTTTTCTAACTTGGCTGCTCTGGCTACAGAAATAGAGGAGAGA
AGCTCCTGTATTGGTGCTGAGCATGTGAGACTCACATGCTTGGATCTTAT
GCGGGCTTGTGATCAGATGCAAAAGCAGAAGTATGAAACTTTCTTCTTCT
GTCAGGCCTTGAGTTGGACAAAGAATGAATTCGCTCATACCCGTAACAAG
TTGCAGGTCCTTGTCCAGTGGTTGTTAAATCTTTCTGCCTTGGCTGCATC
GAATGCAGATGGAGCGGAAGATTATGAGGCTCGAAGCAAAACAGCAAAAA
TAGAATGCTATCAAGTAGTATTCTTGAATGTGCAATGA
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protein sequence of Tc09v2_p023970.1

>Tc09v2_p023970.1 ID=Tc09v2_p023970.1|Name=Tc09v2_p023970.1|organism=Theobroma cacao|type=polypeptide|length=146bp
MVGRADHFVQLINTYCLNVETILSKLESYIDLPNVDFSNLAALATEIEER
SSCIGAEHVRLTCLDLMRACDQMQKQKYETFFFCQALSWTKNEFAHTRNK
LQVLVQWLLNLSALAASNADGAEDYEARSKTAKIECYQVVFLNVQ*
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