Tc09v2_t023420.1

Overview
NameTc09v2_t023420.1
Unique NameTc09v2_t023420.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length999
Properties
Property NameValue
NotePeroxidase 60
Model evidenceSupporting evidence includes similarity to: 13 Proteins, and 74% coverage of the annotated genomic feature by RNAseq alignments
Productperoxidase 60
Cross References
External references for this mRNA
DatabaseAccession
GeneID18590293
GenbankXM_007015720.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc09v2_g023420Tc09v2_g023420Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc09v2_p023420.1Tc09v2_p023420.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto470113auto470113Theobroma cacaoexon
exon-auto470114auto470114Theobroma cacaoexon
exon-auto470115auto470115Theobroma cacaoexon
exon-auto470116auto470116Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto470117auto470117Theobroma cacaoCDS
CDS-auto470118auto470118Theobroma cacaoCDS
CDS-auto470119auto470119Theobroma cacaoCDS
CDS-auto470120auto470120Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc09v2_t023420.1 ID=Tc09v2_t023420.1|Name=Tc09v2_t023420.1|organism=Theobroma cacao|type=mRNA|length=999bp
ATGAGAATGTCAGCTGTAGCTGCTTTCGCTCTAGCCCTTGGTCTCATCCT
TGTGAACTTCACAAGGCAATGCCACGCTGCTCTTCAGGTAGGATATTACA
AGGACAAATGCATGTTAAAAGATGTTGAGGGCATTGTTTTCTCTGCAGTC
GCACGAAGATTCGACAAGGATCCAACAATTGCAGCTGCTCTCATTCGTTT
ACACTTCCATGACTGCTTTGTCAATGGATGTGATGCATCAATTCTCCTAG
ACGGTAACTCCAGTGAGAAAACTGCGCCTCCAAATCGAAGTGTTAGGGGT
TATGATGTTATTGATGAAGCAAAGGGTGAAGTGGAGAAAGCCTGTAAAGG
AGTTGTTTCTTGTGCTGATATCATAGCCATGGCTGCTAGAGATGCTGTAG
CGTTGAGTGGAGGAGGGCGGTACAGTGTTGAGACGGGCAGAAGGGACGGG
TTTGTATCTTTGGCTTCGAATGTAGATCTTCCGTCTCCAAGTTTCTCAGT
TTCCCAATCCGTTGATGCATTTGCCAAGAAAGGACTTGATCCTACAGATA
TGGTTCTTCTTCTTGGTGGTCATACAGTTGGGGTTGCACATTGTTCTCTC
TTCCAAGACCGACTTTACAATTTCCAGAACAGCGGGGAGCCAGACCCGAC
GATGGATCTATCCTTACTTCGGAAACTGAAATCAATCTGTCCGCAAAATT
CACCAGCCGACAGATCTGTTGACCTTGACCAGAATCCTCTGAGTTCATTA
ACCGTGGACAACTCCTTCTACAAACAGATAATTCTCAAGAGGGGAATTCT
TCAAATTGATCAAGAGCTGGCCTTCGACCCCTTGACTAATGGCACAGTGG
CCAGTATAGCCACCAGCAATGACTTCCCTGCTAAGTTCGGACAGGCAATG
GTTAAGTTGGGAGCTGTTGATGTCCTTACAGGCTCACAAGGGGAGATTAG
GAAATCATGCGGTGTCACCAATAGTTATCCCAACTTCCTCCATTTTTGA
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protein sequence of Tc09v2_p023420.1

>Tc09v2_p023420.1 ID=Tc09v2_p023420.1|Name=Tc09v2_p023420.1|organism=Theobroma cacao|type=polypeptide|length=333bp
MRMSAVAAFALALGLILVNFTRQCHAALQVGYYKDKCMLKDVEGIVFSAV
ARRFDKDPTIAAALIRLHFHDCFVNGCDASILLDGNSSEKTAPPNRSVRG
YDVIDEAKGEVEKACKGVVSCADIIAMAARDAVALSGGGRYSVETGRRDG
FVSLASNVDLPSPSFSVSQSVDAFAKKGLDPTDMVLLLGGHTVGVAHCSL
FQDRLYNFQNSGEPDPTMDLSLLRKLKSICPQNSPADRSVDLDQNPLSSL
TVDNSFYKQIILKRGILQIDQELAFDPLTNGTVASIATSNDFPAKFGQAM
VKLGAVDVLTGSQGEIRKSCGVTNSYPNFLHF*
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