Tc09v2_t023050.1

Overview
NameTc09v2_t023050.1
Unique NameTc09v2_t023050.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length843
Properties
Property NameValue
NoteProbable CCR4-associated factor 1 homolog 9
Model evidenceSupporting evidence includes similarity to: 28 ESTs, 30 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
Productprobable CCR4-associated factor 1 homolog 9
Cross References
External references for this mRNA
DatabaseAccession
GeneID18590248
GenbankXM_007015662.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc09v2_g023050Tc09v2_g023050Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc09v2_p023050.1Tc09v2_p023050.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto469583auto469583Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto469584auto469584Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc09v2_t023050.1 ID=Tc09v2_t023050.1|Name=Tc09v2_t023050.1|organism=Theobroma cacao|type=mRNA|length=843bp
ATGGGGTTTCAAGATTCACACAGGAGTTCAAAGCCTGTAATGATAAGGGA
AGTTTGGTCGGATAACTTGGAATCGGAGTTCGAGTTGATCAGTCAGGTAA
TTGATGAGTACCCTTTCATTTCTATGGACACCGAATTTCCGGGTCTTGTT
ATCAAACCGAAAGTGGACCCCTCTAGGCCTTACCACAGCCAACTCCAGCC
GTCTGACCATTACAAGTTCCTCAAATCCAACGTTGATGCTTTGAACTTGA
TCCAGGTGGGCCTCACCCTCTCTGATTCTTCAGGTAATCTGCCTAACCTC
GGAACCGACACTCAGTTCATCTGGGAATTCAATTTCAGCGACTTCGATGT
GGAGCGTGACGCTCACGCCCCTGATTCGATCGAGCTTTTGAGACGGCAAG
GGATCGATTTTGAGAAGAACAGGGAAAAGGGGATTGACTCGGTACGGTTC
GCTGAGTTGATGATGTCGTCTGGCCTCGTGTGTAATGATTCAGTGAGCTG
GGTGACTTTTCACAGCGCACATGATTTCGGGTACCTGGTTAAGATCCTGA
CGCGCCGGGAATTGCCCGGGGACCTCGATGAGTTTTTGAGGATTCTCAGG
GTGTTTTTCGGAAACAGAGTTTATGACGTGAAGCACATGATGAGATTTTG
CAAGAGCTTGTACGGTGGGTTGGACCGGGTGGCTCGGACCCTGGATGTGA
ACCGGGCGGTTGGGAAATGTCACCAAGCGGGGTCCGATTCCTTGCTGACG
TGGCATGCGTTTCAGAAAATGAGGGACGTGTATTTTGTGAAGGATGGACC
GGAAAAGCATGCCGGTGTATTGTATGGATTAGAAGTGTATTAA
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protein sequence of Tc09v2_p023050.1

>Tc09v2_p023050.1 ID=Tc09v2_p023050.1|Name=Tc09v2_p023050.1|organism=Theobroma cacao|type=polypeptide|length=281bp
MGFQDSHRSSKPVMIREVWSDNLESEFELISQVIDEYPFISMDTEFPGLV
IKPKVDPSRPYHSQLQPSDHYKFLKSNVDALNLIQVGLTLSDSSGNLPNL
GTDTQFIWEFNFSDFDVERDAHAPDSIELLRRQGIDFEKNREKGIDSVRF
AELMMSSGLVCNDSVSWVTFHSAHDFGYLVKILTRRELPGDLDEFLRILR
VFFGNRVYDVKHMMRFCKSLYGGLDRVARTLDVNRAVGKCHQAGSDSLLT
WHAFQKMRDVYFVKDGPEKHAGVLYGLEVY*
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