Tc09v2_t023020.1

Overview
NameTc09v2_t023020.1
Unique NameTc09v2_t023020.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length501
Properties
Property NameValue
NoteUncharacterized protein
Model evidenceSupporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
Productuncharacterized LOC18590243
Cross References
External references for this mRNA
DatabaseAccession
GeneID18590243
GenbankXM_007015657.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc09v2_g023020Tc09v2_g023020Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc09v2_p023020.1Tc09v2_p023020.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto469568auto469568Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto469569auto469569Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc09v2_t023020.1 ID=Tc09v2_t023020.1|Name=Tc09v2_t023020.1|organism=Theobroma cacao|type=mRNA|length=501bp
ATGGCTCCCCAAGCTAATAATGAGTCAAAAAAACTTGCTTTCACGGCCAA
AATAGAAAGCAACAACTTCCCAAAAACCGATCGACAGAGTTCATACTATG
CAGCCCTTGACTCAGAGTTGGATTCTTCGAGCCCTCTTATATCGACATAC
ACTTCATTGAAAGACTTGATGCCTTCAAGCAAAGGGTCCCAGTCCCAGAA
CAATCCTTATTCAGCAGGGTTAACGATTGCATCTGCGTACGAGATTCCTA
TAACCAACTTGCTGGTGAAGAAAGCTGCATGGGTTTATTTGCAGCCAATG
GCGTTGCCACCTAATTCAAGCAGTACTACTCCAAAGGAACACATTCTTTG
CCGTGCTTGGGTGGAGGTGAAGTCGCCGGTGAAAGCTTGCTTCAGGTTTA
TTAGGAGGACCATCATTCACAAGATTGCATGTGCTTTTGAGAAGTTTTCT
GGAGCAATTCTTTTTGGTCGAAGCAGCAGCTTAGGGATGAATCATAATTG
A
back to top

protein sequence of Tc09v2_p023020.1

>Tc09v2_p023020.1 ID=Tc09v2_p023020.1|Name=Tc09v2_p023020.1|organism=Theobroma cacao|type=polypeptide|length=167bp
MAPQANNESKKLAFTAKIESNNFPKTDRQSSYYAALDSELDSSSPLISTY
TSLKDLMPSSKGSQSQNNPYSAGLTIASAYEIPITNLLVKKAAWVYLQPM
ALPPNSSSTTPKEHILCRAWVEVKSPVKACFRFIRRTIIHKIACAFEKFS
GAILFGRSSSLGMNHN*
back to top