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Properties
Property Name | Value |
Model evidence | Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns |
Product | probable RNA polymerase II transcription factor B subunit 1-1, transcript variant X1 |
Note | Probable RNA polymerase II transcription factor B subunit 1-1 |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Tc09v2_t022290.2 ID=Tc09v2_t022290.2|Name=Tc09v2_t022290.2|organism=Theobroma cacao|type=mRNA|length=1794bp ATGGCGAGTGGTCACGTGACTAAGCGAGCTAAGTATAAAACCACAATCAA GGACCCTGGAACTCCCGGTACTCTTAGAATGACACTTGAGAAAATCTTAT TTGTGCCTCATAATCCTAAGTCAGCTGGAAAGCTTGATGTCGAGTTTCGA TTCATTAAAGGTCAAAAGCATACGAAGGAGGGATCAAGTAAGCCGCCATG GCTTAATCTTACAAACAATCAGAATGGGAGTTTCATCTTTGAGTTTGAAA ATTATTCTGATCTCCAAGATTGTCGAGATTTTGTAGGCAAAGTTCTTGCA AAGAGTGGAGAAGTTTCTGAAAAACCTACTGTCACATATCCTGATGAACA ACTCAGTGCAGCTGAAATGGAGCTTCGCATTAAGCTATTACGGGAAGATA GTGAATTGCAGAAACTTCACAAGCAATTTGTGCTTAGCGGTGTCCTGACA GAAGCTGAATTTTGGGCAACACGGAAGAAGTTGCTGGATAGAGAGGCCAA CAAAAAGACAAAGCAGAGGCTGGGTTTCAAAAGTGCAATGATTTCTGACA TTAAACCATCAACTGATGGTCGGACGAACAAAGTCACATTTAATTTGACC CCAGAGATCATTCTTCAAATTTTTGCTGAGAAGCCAGCTGTTCACCGTGC ATTCCTAACTTATGTTCCTAACAAGATGTCAGAACGGGATTTCTGGACCA AATATTTTAGAGCAGAATACCTACATAGTACGAAAAATAGTGTTGCTGCT GCAGCAGAGGCTGCTGAAGATGAGGAACTTGCTGTTTTTCTCAAGCAGGA TGACATATTGGCAAGCGAGTCTCGGTCGAAGATCAGGCGGGTTGACCCAA CGCTGGACATGGATGCTGATGAGGGGGATGATTATACACATCTTCCCGAT CATGGAATCTTTCGTGATGGTAGTAAGGAAGTAACTGAATCAGAAAATGA GCTATACAGAAGAACTCTATCCCAAGATATTAACCGGCATGCTGCAGTTG TTCTTGAGGGAAGAGCAGTTGATGTGGAGTTGGAAGACACGAGGTCTGTA GCAGAAGCTCTTGCTCGGTCAAAACAAGAATCATCAACTAAGGGAGAATC ATATGGGGATACAAGCCGGGAGAGGTTAGATAGGGTATCAAGGATGACTG AAATAGAAGATCTTCAGGCACCTAATAATCTTCCACTGGCACCACTTTGC ATTAAGGATCCTCGAGACTATTTTGACTCTCAACAAGTTAATGCACTTAG AACTTCTGGAGATGAACTTGCTGGAACTGAACAAATAAAATGCAGTTTGA GCAGCCAGGAGGTGTATGGTTCTTTGAGAGAGTCCATCTCTGTGATCAAA GCTATGGGGTTGAAGGATCCAATAGTCAAGCCTGAAGTTGCTCATCAAGT TTTTGATGCTTTGACCCAGAGTATCTCAACTACCAAATATAATATCGGGA AAAATCCTCAAGAGAGTGTTCTGGACAGATTGCCAAAGAAAATTAAAGAG GAACTATTGCATCACTGGACATCAATCCTTGAACTGCTCAGACATTTTTG GGCATCATATCCTATCACCACCAGTTACCTCTATACCAAGGTAAACAGAC TGAAGGATGCCATGTCACATATCTATCCACAGCTAGAGGAGATTAAGGGA TCTGTCCCGTCAGACCTTCGGCATCAGGTTTCCCTCCTTATTCGTCCAAT GCATCAGGCTCTAGATGCTGCGATTCAACATTATGAAGCAGACATGCAGA AGAGATCTGCGCGAAGTGGAGAGAGACCAAATGGATATGCCTAG back to topprotein sequence of Tc09v2_p022290.2 >Tc09v2_p022290.2 ID=Tc09v2_p022290.2|Name=Tc09v2_p022290.2|organism=Theobroma cacao|type=polypeptide|length=598bp
MASGHVTKRAKYKTTIKDPGTPGTLRMTLEKILFVPHNPKSAGKLDVEFR FIKGQKHTKEGSSKPPWLNLTNNQNGSFIFEFENYSDLQDCRDFVGKVLA KSGEVSEKPTVTYPDEQLSAAEMELRIKLLREDSELQKLHKQFVLSGVLT EAEFWATRKKLLDREANKKTKQRLGFKSAMISDIKPSTDGRTNKVTFNLT PEIILQIFAEKPAVHRAFLTYVPNKMSERDFWTKYFRAEYLHSTKNSVAA AAEAAEDEELAVFLKQDDILASESRSKIRRVDPTLDMDADEGDDYTHLPD HGIFRDGSKEVTESENELYRRTLSQDINRHAAVVLEGRAVDVELEDTRSV AEALARSKQESSTKGESYGDTSRERLDRVSRMTEIEDLQAPNNLPLAPLC IKDPRDYFDSQQVNALRTSGDELAGTEQIKCSLSSQEVYGSLRESISVIK AMGLKDPIVKPEVAHQVFDALTQSISTTKYNIGKNPQESVLDRLPKKIKE ELLHHWTSILELLRHFWASYPITTSYLYTKVNRLKDAMSHIYPQLEEIKG SVPSDLRHQVSLLIRPMHQALDAAIQHYEADMQKRSARSGERPNGYA* back to top
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