Tc09v2_t021510.1

Overview
NameTc09v2_t021510.1
Unique NameTc09v2_t021510.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length960
Properties
Property NameValue
NotePutative pectinesterase 11
Model evidenceSupporting evidence includes similarity to: 17 Proteins, and 13% coverage of the annotated genomic feature by RNAseq alignments
Productputative pectinesterase 11
Cross References
External references for this mRNA
DatabaseAccession
GeneID108663294
GenbankXM_018126901.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc09v2_g021510Tc09v2_g021510Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc09v2_p021510.1Tc09v2_p021510.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto466318auto466318Theobroma cacaoexon
exon-auto466319auto466319Theobroma cacaoexon
exon-auto466320auto466320Theobroma cacaoexon
exon-auto466321auto466321Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto466322auto466322Theobroma cacaoCDS
CDS-auto466323auto466323Theobroma cacaoCDS
CDS-auto466324auto466324Theobroma cacaoCDS
CDS-auto466325auto466325Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc09v2_t021510.1 ID=Tc09v2_t021510.1|Name=Tc09v2_t021510.1|organism=Theobroma cacao|type=mRNA|length=960bp
ATGGCTAGTCCTCAATCAATTTACGCTGCTGAAAATCCTGCGGCCATACT
TATAAGAGTTGATCCATCAGGGAAGGGAGACTACAGGAAAATACAAGATG
CCATTGACGCCGTGCCATCCAACAACAAAGAAGTTGTGTTCATTTTGGTC
AAGCCTGGTATCTACAAAGAAAAGATTGTTGTGCCTGCGGACAGGCCCTT
CATTACAATAAGTGGTTCAAAGGCAAATGGCACAATAATAACTTGGGATG
ATAGTGGGAATATATTTGAATCTCCTACCTTCTCTGTGTTGGCTTCTGAT
TTTGTTGCCCGATACCTCACAATTCAGAACACACATGGAGCTGGTGCCAA
AGCAGTAGCATTGAGGGTATCCAGAGATAGGGTAGCTTTCTTCGGATGCA
GAATTTTATCCTATCAGGATACCTTGCTAGATGACACCGGAAGACACTAC
TACAGCGGTTGTTACATTGAAGGAGCTGTCGACTTCATTTGTGGGAATGC
TGCTTCTCTTTTTGAGAGATGCCACTTGCATTCACTCTCGGAAGGAGATG
CAGCTATCACAGCCCAACGCAGGGAGTCACCTTCAGAAGACACAGGCTTT
ACTTTCTTGGGTTGCAAGGTCACTGGCGTCAAGACTGCTCTACTGGGAAG
GGCATGGGGTCCATATTCCAGGGTCGTTTTCGCCCTTACCTATATGTCTA
ATGTGATTCTGCCCCAAGGGTGGGATTACTGGGGAGACTCATCCAAGCAA
AGCTCGGTTTTCTACAGAGAATACAAATGTTATGGACCTGGAGCCAATAC
AAAGAAAAGGGTTGAATGGTCTCAAGAGCTGACAGGCATTGAGGCCCAGC
CTTTCTTGACAAAGAACATGATCGGTGGCAAGAGTTGGATCAGATCAACG
CCAACCCGTTTCAAGAAAGCTTCAACTGCCATATCTAACAATTCCACTAG
GCATGCCTAA
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protein sequence of Tc09v2_p021510.1

>Tc09v2_p021510.1 ID=Tc09v2_p021510.1|Name=Tc09v2_p021510.1|organism=Theobroma cacao|type=polypeptide|length=320bp
MASPQSIYAAENPAAILIRVDPSGKGDYRKIQDAIDAVPSNNKEVVFILV
KPGIYKEKIVVPADRPFITISGSKANGTIITWDDSGNIFESPTFSVLASD
FVARYLTIQNTHGAGAKAVALRVSRDRVAFFGCRILSYQDTLLDDTGRHY
YSGCYIEGAVDFICGNAASLFERCHLHSLSEGDAAITAQRRESPSEDTGF
TFLGCKVTGVKTALLGRAWGPYSRVVFALTYMSNVILPQGWDYWGDSSKQ
SSVFYREYKCYGPGANTKKRVEWSQELTGIEAQPFLTKNMIGGKSWIRST
PTRFKKASTAISNNSTRHA*
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