Tc09v2_t021280.5

Overview
NameTc09v2_t021280.5
Unique NameTc09v2_t021280.5
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length1320
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 5 ESTs, 183 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
ProductCBL-interacting protein kinase 32, transcript variant X6
NoteCBL-interacting serine/threonine-protein kinase 3
Cross References
External references for this mRNA
DatabaseAccession
GeneID18590051
GenbankXM_018127379.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc09v2_g021280Tc09v2_g021280Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc09v2_p021280.5Tc09v2_p021280.5Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto465909auto465909Theobroma cacaoexon
exon-auto465910auto465910Theobroma cacaoexon
exon-auto465911auto465911Theobroma cacaoexon
exon-auto465912auto465912Theobroma cacaoexon
exon-auto465913auto465913Theobroma cacaoexon
exon-auto465914auto465914Theobroma cacaoexon
exon-auto465915auto465915Theobroma cacaoexon
exon-auto465916auto465916Theobroma cacaoexon
exon-auto465917auto465917Theobroma cacaoexon
exon-auto465918auto465918Theobroma cacaoexon
exon-auto465919auto465919Theobroma cacaoexon
exon-auto465920auto465920Theobroma cacaoexon
exon-auto465921auto465921Theobroma cacaoexon
exon-auto465922auto465922Theobroma cacaoexon
exon-auto465923auto465923Theobroma cacaoexon
exon-auto465924auto465924Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto465925auto465925Theobroma cacaoCDS
CDS-auto465926auto465926Theobroma cacaoCDS
CDS-auto465927auto465927Theobroma cacaoCDS
CDS-auto465928auto465928Theobroma cacaoCDS
CDS-auto465929auto465929Theobroma cacaoCDS
CDS-auto465930auto465930Theobroma cacaoCDS
CDS-auto465931auto465931Theobroma cacaoCDS
CDS-auto465932auto465932Theobroma cacaoCDS
CDS-auto465933auto465933Theobroma cacaoCDS
CDS-auto465934auto465934Theobroma cacaoCDS
CDS-auto465935auto465935Theobroma cacaoCDS
CDS-auto465936auto465936Theobroma cacaoCDS
CDS-auto465937auto465937Theobroma cacaoCDS
CDS-auto465938auto465938Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc09v2_t021280.5 ID=Tc09v2_t021280.5|Name=Tc09v2_t021280.5|organism=Theobroma cacao|type=mRNA|length=1320bp
ATGAGTCAACCTAAAATTAAGCGACGTGTGGGTAAATATGAGGTGGGAAG
GACCATTGGCGAGGGGACATTTGCTAAAGTGAAGTTTGCAAGAAATTCTG
AAACCGGGGAACCTGTAGCACTTAAGATCCTTGATAAAGAGAAGGTTCTT
AAGCATAAGATGGCTGAGCAGATCAAGCGAGAAATAGCAACAATGAAGTT
GATAAAGCATCCAAATGTTGTCCGTTTATATGAGGTGATGGGAAGCAAGA
CAAAGATATTTATTGTTTTGGAATTCGTTACCGGGGGAGAGCTCTTTGAC
AAAATTGTAAAACATGGACGGATGAGAGAAGAAGAAGCACGGAGATATTT
CCACCAGCTCATCAATGCTGTTGATTATTGCCATAGCAGGGGTGTCTACC
ATAGGGACCTAAAGCCTGAAAATTTGCTGTTGGATGCTTATGGTAACCTC
AAAGTTTCTGACTTTGGATTGAGTGCACTATCTCAGCAAGTCAGGGACGA
TGGTCTCCTTCACACTACATGTGGAACACCAAATTACGTTGCTCCTGAGG
TCCTTAATGATAGAGGCTATGATGGGGCAACCGCGGACCTTTGGTCATGT
GGCGTGATACTCTTTGTGTTGCTTGCAGGTTACTTGCCTTTTGATGATCC
TAATCTTATGACCCTGTATAAAAAAATTTCAGCAGCTGAATTCACTTGCC
CCCCTTGGCTATCTTTTAGTGCAATGAAATTGATAACTCGAATCTTGGAT
CCAAACCCAATGACTCGAATTACCATTCCTGAAATTTTGGAAGATGAATG
GTTTAAAAAAGATTACAAACCTCCTGTGTTTGAGGAGAAAGAGGATACAA
ACTTAGATGATGTAGAAGCTGTTTTTAAGGATTCTGAAGAGCACCATGTA
ATGGAAAAGAGAGAAGAACAACCGGCAGCTATGAATGCTTTCGAGTTAAT
TTCTATGTCAAAAGGGTTAAACCTTGGGAATCTGTTTGATGCGGAACAGG
GATTTAAGAGAGAAACAAGGTTTACATCTAAATGTCCTGCTAATGAGATT
ATCCATAAGATTGAGGAAGCTGCAAAGCCTCTTGGGTTTGATGTCCACAA
GAAAAACTACAAGATGAGACTTGAGAATTCGAAAGCTGGGAGGAAAGGAA
ACCTTAACGTGGCCACAGAGATATTTCAAGTGGCACCTTCTTTACATATG
GTTGAGGTGAGAAAAGCAAAAGGGGACACATTGGAATTCCATAAGTTCTA
TAAAAACCTTTCGACCTGTCTCGAAGATGTTGTTTGGAAAACTGAGGAGG
ACATGCAAGAAGTAAAGTGA
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protein sequence of Tc09v2_p021280.5

>Tc09v2_p021280.5 ID=Tc09v2_p021280.5|Name=Tc09v2_p021280.5|organism=Theobroma cacao|type=polypeptide|length=440bp
MSQPKIKRRVGKYEVGRTIGEGTFAKVKFARNSETGEPVALKILDKEKVL
KHKMAEQIKREIATMKLIKHPNVVRLYEVMGSKTKIFIVLEFVTGGELFD
KIVKHGRMREEEARRYFHQLINAVDYCHSRGVYHRDLKPENLLLDAYGNL
KVSDFGLSALSQQVRDDGLLHTTCGTPNYVAPEVLNDRGYDGATADLWSC
GVILFVLLAGYLPFDDPNLMTLYKKISAAEFTCPPWLSFSAMKLITRILD
PNPMTRITIPEILEDEWFKKDYKPPVFEEKEDTNLDDVEAVFKDSEEHHV
MEKREEQPAAMNAFELISMSKGLNLGNLFDAEQGFKRETRFTSKCPANEI
IHKIEEAAKPLGFDVHKKNYKMRLENSKAGRKGNLNVATEIFQVAPSLHM
VEVRKAKGDTLEFHKFYKNLSTCLEDVVWKTEEDMQEVK*
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