Tc09v2_t020510.1

Overview
NameTc09v2_t020510.1
Unique NameTc09v2_t020510.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length1527
Properties
Property NameValue
NoteFlavonoid 3',5'-hydroxylase 1
Model evidenceSupporting evidence includes similarity to: 1 EST, 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
Productflavonoid 3',5'-hydroxylase 1
Cross References
External references for this mRNA
DatabaseAccession
GeneID18589969
GenbankXM_007015193.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc09v2_g020510Tc09v2_g020510Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc09v2_p020510.1Tc09v2_p020510.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto464400auto464400Theobroma cacaoexon
exon-auto464401auto464401Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto464402auto464402Theobroma cacaoCDS
CDS-auto464403auto464403Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc09v2_t020510.1 ID=Tc09v2_t020510.1|Name=Tc09v2_t020510.1|organism=Theobroma cacao|type=mRNA|length=1527bp
ATGGCACTTGACACATTGCTCCTTCGGGAGCTCACAGCAGCAGCTATTCT
CTTCTTTATCACACGTTATTTCATTCGTTCTCTTCTCAGAAAATCAACCA
AAACGCTTCCCCCAGGCCCGAAGGGGTGGCCGGCTGTGGGTGCTCTTCCA
CTCCTAGGGTCCATGCCCCATGTCACACTGGCCAAATTAGCCAAAAAATA
TGGACCTGTCATGTACCTGAAAATGGGAACATGCAGCATGGTGGTGGCCT
CAACCCCAGATGCTGCTCGAGCTTTCCTTAAAACCCTTGACTTGAATTTC
TCCAATCGACCCGCTAATGCTGGTGCCACCCACTTAGCTTATAACTCTCA
AGACATGGTCTTTGCCGACTATGGTCCAAGGTGGAAATTGCTTCGTAAAC
TGAGCAATCTACACATGCTTGGTGGTAAAGCCCTAGAGGATTGGGCACAA
GTCCGTACCGTTGAGCTAGGCCATATGCTTCGAGCTATGTGTGAATCTAG
CCAAAAGGGTGAGCCAGTGGTTGTGCCAGAAATGTTGACGTATGCCATGG
CCAATATGATCGGCCAAGTGATCCTCAGTCGACGAGTTTTCGTGACGAAG
GGGTCAGAGTCCAATGAATTCAAAGACATGGTGGTGGAGCTCATGACCTC
TGCCGGGTTTTTCAATATCGGTGACTTTATACCGTCCATTGCATGGATGG
ATTTGCAAGGGATTGAACGTGAGATGAAGAAATTACATAAAAGATGGGAT
GTGCTGCTGACAAAGATGATGAAAGAGCACGCGGCAACAGCTCATGAGCG
GAAGAGTAAGCCTGATTTCCTTGATATTATTATGGATAACAGAGAAAACT
CTGAAGGGGAAAAGCTCAGTTTGACCAATGTCAAGGCACTTCTCTTGAAT
CTATTCACTGCTGGCACGGACACATCCTCTAGCATAATCGAATGGGCATT
AGCTGAAATCATGCAAAATCCTACCATACTCAACAAAGCTCATGACGAGA
TGGATAAAGTCATTGGCAGAAACCGAAGGCTCCAAGAATCTGACATACCC
AGACTTGCATACTTTCAAGCCATATGCAAAGAAACATTCCGAAAACATCC
ATCGACTCCGTTGAACTTACCGCGAGTTTCCTCCCAAGCTTGTGAGATTA
ATGGCTACTACATCCCAAGAAACTCTAGACTTAGTGTCAACATTTGGGCA
ATTGGTCGTGACCCTGACGTTTGGGATAATCCACTAGATTTCAACCCTGA
AAGATTTATGAGTGGTAAAAATGCCAAAATCGATCCACGTGGAAACGATT
TTGAGCTAATTCCATTTGGTGCTGGAAGAAGAATCTGTGCTGGAACCAGG
ATGGGTATTGTGCTAGTTGAGTACATTTTAGGCACATTGGTGCACTCTTT
CGAGTGGATCCCACCAAACGGTGGGGAACTAAACATGGATGAGGCCTTTG
GGCTTGCGTTGCAAAAGGCTGTGCCTCTTTCAGCCATGGTTCGCCCACGG
CTCGCCCCAAGTGCTTATGTTTCCTAA
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protein sequence of Tc09v2_p020510.1

>Tc09v2_p020510.1 ID=Tc09v2_p020510.1|Name=Tc09v2_p020510.1|organism=Theobroma cacao|type=polypeptide|length=509bp
MALDTLLLRELTAAAILFFITRYFIRSLLRKSTKTLPPGPKGWPAVGALP
LLGSMPHVTLAKLAKKYGPVMYLKMGTCSMVVASTPDAARAFLKTLDLNF
SNRPANAGATHLAYNSQDMVFADYGPRWKLLRKLSNLHMLGGKALEDWAQ
VRTVELGHMLRAMCESSQKGEPVVVPEMLTYAMANMIGQVILSRRVFVTK
GSESNEFKDMVVELMTSAGFFNIGDFIPSIAWMDLQGIEREMKKLHKRWD
VLLTKMMKEHAATAHERKSKPDFLDIIMDNRENSEGEKLSLTNVKALLLN
LFTAGTDTSSSIIEWALAEIMQNPTILNKAHDEMDKVIGRNRRLQESDIP
RLAYFQAICKETFRKHPSTPLNLPRVSSQACEINGYYIPRNSRLSVNIWA
IGRDPDVWDNPLDFNPERFMSGKNAKIDPRGNDFELIPFGAGRRICAGTR
MGIVLVEYILGTLVHSFEWIPPNGGELNMDEAFGLALQKAVPLSAMVRPR
LAPSAYVS*
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