Tc09v2_t019750.1

Overview
NameTc09v2_t019750.1
Unique NameTc09v2_t019750.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length1758
Properties
Property NameValue
NoteProbable NAD kinase 1
Model evidenceSupporting evidence includes similarity to: 3 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
ProductNAD(H) kinase 1, transcript variant X1
Cross References
External references for this mRNA
DatabaseAccession
GeneID18589875
GenbankXM_007015041.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc09v2_g019750Tc09v2_g019750Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc09v2_p019750.1Tc09v2_p019750.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto462454auto462454Theobroma cacaoexon
exon-auto462455auto462455Theobroma cacaoexon
exon-auto462456auto462456Theobroma cacaoexon
exon-auto462457auto462457Theobroma cacaoexon
exon-auto462458auto462458Theobroma cacaoexon
exon-auto462459auto462459Theobroma cacaoexon
exon-auto462460auto462460Theobroma cacaoexon
exon-auto462461auto462461Theobroma cacaoexon
exon-auto462462auto462462Theobroma cacaoexon
exon-auto462463auto462463Theobroma cacaoexon
exon-auto462464auto462464Theobroma cacaoexon
exon-auto462465auto462465Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto462466auto462466Theobroma cacaoCDS
CDS-auto462467auto462467Theobroma cacaoCDS
CDS-auto462468auto462468Theobroma cacaoCDS
CDS-auto462469auto462469Theobroma cacaoCDS
CDS-auto462470auto462470Theobroma cacaoCDS
CDS-auto462471auto462471Theobroma cacaoCDS
CDS-auto462472auto462472Theobroma cacaoCDS
CDS-auto462473auto462473Theobroma cacaoCDS
CDS-auto462474auto462474Theobroma cacaoCDS
CDS-auto462475auto462475Theobroma cacaoCDS
CDS-auto462476auto462476Theobroma cacaoCDS
CDS-auto462477auto462477Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc09v2_t019750.1 ID=Tc09v2_t019750.1|Name=Tc09v2_t019750.1|organism=Theobroma cacao|type=mRNA|length=1758bp
ATGTCTCCCAGCAAGCTTGATTCCACTGCTTCCTTTGGAAATGGGGATGC
AAGTATTTCTTGCTCAAAGCCAGAGAATGGTTTGGTTGATTCACTTTCTC
TTTTCCATTCTGAGAAGGCAGTGGAAGAACTCCTTCAACAAACTCCTGTT
GAAGGAATGGATGAACATCTAATAGAGTTCTCAGAAGCTTTGAGAACTGT
TGCAAAGGCATTAAGACGAGCTGCTGAAGGAAAGGCTTCTGCACAAGCTG
AGGCTGCTGAATGGAAGCGTAGATATGAGCTGGAGAGAACCAGGAATATA
CAGATGGAGCGTAAAGTATCAGGCAATAATATTTGTGAAATGCTTCGAAG
TTGGTGGACTTGGACTTCTCTAGATAATGCAACAGGAATGATAAGAATTA
TGCTTCCATGTCTTGTCTCCTGGGATGTTTGGAAAGAACGAAATAAGAGA
GTATCGGAAGCTCGAATTGCAGAGTGGTTCTCTGCAGAGCAAAATGGGGA
TTTTGATTGTGGGAAGGTAGAGAACTCAGACAACCAATTGGTACAGCAGA
ATGAACCAGATGAGCATTCCGAGAAAGGCTGTATGAAGCATGGGATTTGC
TCCCACGAGGTTCTTCGGGACAGAGAATCAGATTCCAATTCCAATGGGGA
TCATAATAAGATGATGAGAAAGGCATCATTTAAACTTTCATGGTGGTGCA
AGGGTGAGAATGGTGATCAGCACAAGCATGACATTGTCTCTTTTGAAAAG
GGGAATATTACGACTGCCGAACGCAGCAGTAAACAGATTTCTCTGAAGTG
GGAATCTGACCCACAGACTGTGCTTATTTTGACAAAACCAAATTCAGTCT
CTGTCCGAATTCTTTGTGCACAAATGGTCAGATGGTTGAAAGAGAAGAAA
AAATTAAACATTTATGTCGAACCACGCGTGAGAGTTGAGCTTCTGACAGA
GTCATCTGACTTCAACTATGTACAAACATGGAAAGATGATAGGGAAATTT
TGCTCCTACACACAAAAGTTGATCTAGTGATAACTCTTGGTGGCGATGGA
ACTGTTCTATGGGCAGCATCAATGTTCAAGGGACCGGTTCCTCCAATCGT
TCCATTTTCTTTAGGGTCTTTGGGCTTTATGACTCCTTTTTATAGTGAAC
ATTACAAAGAATGCCTTGATTCTGTCCTGAGGGGACCTATCAGTATAACA
TTACGACACCGCTTGCTGTGCCGTGTTGTTAGAGATGCAGCTAAAAATGA
GTACGACACAGAAGAACCTATTCTTGTTCTAAATGAGGTTACGATTGATC
GTGGAATATCATCGTACCTCACAAATCTGGAATGCTATTGTGACAATTCC
TTCGTCACATGCGTGCAAGGGGATGGTTTGATTTTATCAACAACATCTGG
TAGCACTGCATATTCATTGGCAGCTGGTGGATCAATGGTCCATCCACAGG
TCCCTGGTATTTTGTTCACACCAATTTGTCCACATTCATTATCCTTTCGA
CCTCTGATATTGCCTGAGCATGTAACAGTGCGAATAGTGGTGCCTTTTAA
TAGCAGAAGTCCTGCTTGGGCATCATTTGATGGAAAGGACAGAAAACAAT
TGGCTGCTGGGGATGCTCTTTTGTGCAGTATGGCACCTTGGCCTGTTCCT
ACAGCTTGTCAAGTTGATTCTACTAATGATTTTTTACGCAGCATCCACGA
TGGCCTTCATTGGAATCTGAGGAAGACCCAGTCGTTTGATGGTCCTCGGG
ATTTATAG
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protein sequence of Tc09v2_p019750.1

>Tc09v2_p019750.1 ID=Tc09v2_p019750.1|Name=Tc09v2_p019750.1|organism=Theobroma cacao|type=polypeptide|length=586bp
MSPSKLDSTASFGNGDASISCSKPENGLVDSLSLFHSEKAVEELLQQTPV
EGMDEHLIEFSEALRTVAKALRRAAEGKASAQAEAAEWKRRYELERTRNI
QMERKVSGNNICEMLRSWWTWTSLDNATGMIRIMLPCLVSWDVWKERNKR
VSEARIAEWFSAEQNGDFDCGKVENSDNQLVQQNEPDEHSEKGCMKHGIC
SHEVLRDRESDSNSNGDHNKMMRKASFKLSWWCKGENGDQHKHDIVSFEK
GNITTAERSSKQISLKWESDPQTVLILTKPNSVSVRILCAQMVRWLKEKK
KLNIYVEPRVRVELLTESSDFNYVQTWKDDREILLLHTKVDLVITLGGDG
TVLWAASMFKGPVPPIVPFSLGSLGFMTPFYSEHYKECLDSVLRGPISIT
LRHRLLCRVVRDAAKNEYDTEEPILVLNEVTIDRGISSYLTNLECYCDNS
FVTCVQGDGLILSTTSGSTAYSLAAGGSMVHPQVPGILFTPICPHSLSFR
PLILPEHVTVRIVVPFNSRSPAWASFDGKDRKQLAAGDALLCSMAPWPVP
TACQVDSTNDFLRSIHDGLHWNLRKTQSFDGPRDL*
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