Tc09v2_t018700.1

Overview
NameTc09v2_t018700.1
Unique NameTc09v2_t018700.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length1593
Properties
Property NameValue
NotePutative Flavonoid 3',5'-hydroxylase 1
Model evidenceSupporting evidence includes similarity to: 6 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
Product(S)-N-methylcoclaurine 3'-hydroxylase isozyme 1, transcript variant X1
Cross References
External references for this mRNA
DatabaseAccession
GeneID18589745
GenbankXM_007014856.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc09v2_g018700Tc09v2_g018700Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc09v2_p018700.1Tc09v2_p018700.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto460697auto460697Theobroma cacaoexon
exon-auto460698auto460698Theobroma cacaoexon
exon-auto460699auto460699Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto460700auto460700Theobroma cacaoCDS
CDS-auto460701auto460701Theobroma cacaoCDS
CDS-auto460702auto460702Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc09v2_t018700.1 ID=Tc09v2_t018700.1|Name=Tc09v2_t018700.1|organism=Theobroma cacao|type=mRNA|length=1593bp
ATGGATTTGTTGCATTCTTCCATCTTAAGCGTGATTGCCCATTTTTCTTC
CCTTGTTTCTGGCTCCATGACGATCCTAGCAGTAACAATGTCGATTGCTT
CCTATTTTCTTATCCCTATCCTCCTAGGCGGTCGCTCTAAAAATTGGAAG
AATGCACCACCAGGCCCTGTTGGTTGGCCCATCCTCGGAAGCCTTCCGCA
CCTCAGCCATCGTCTCCATGAAGATTTCTTTCACCTTGCCAAAATCCATG
GCCCACTATTCTGTCTGAAGATGGGCATCAAGCCAGCCATAGTGATTTCC
TCGCCAGAAATGGCATCCGAAATCCTCAAGGAAAAGGAAGGCATGTTCTC
TAGTCGTACCATAACCGAAGCCATTCGAGTCGTCTCTTACGATGCTCATT
CCATCATTTTCTCGCCCTACGGACCGAGGTGGAAGGCTCTTCGAAGAATC
TTGATCACTGAACTACTTTCTCCAAAAGCCTTCGAGCAATTCGAGCCGGT
TCGCACCACACAGGTCCATGGTTTGCTCAAGTATCTATACATACTCTCAA
AGTCGAGCACTCAAGTGAATATAGCAGAATCAGCTTTTACGGCATTGGCC
AACCTTGTGAGTAATATTTTATGCTCCAAAAGCCTTTTCGACAACTCAAA
GCCTGAAGGAAGAAAAATGAAAGAGATGTTCTGGGAGATGATAAAGGTAC
TAGGAACTCCGAACTTTTCTGATCTCATTCCAATTGTTAAACCATTTGAC
CTACAAGGCTTGAAGAGAAAAATTTCTGGGATCTTTGACCAATTGGATGC
TTTCTACGAAAAGCTAATTGAGGAGAGGTTGGCAGAGAAAGGAACAGCTG
AGCTTCAGAGAGGTAACAATGAGACGATGGATATGTTGGATGTTCTTTTG
AGTTATAAGAGTAATGACAAAGAAAATGGTTTGGACCGATTCTCAAGAGC
TATCATCAAAGGAATGCTTTCTGAAATGTTTATTGCAGGAACAGAGACAA
CCTCAAGCACTGTGGAATGGGGCATGACAGAAATACTAAGGAAACCTTCT
GTTCACAAGAAACTACTACTCGAACTGGACCAAGTAGTTGGAAAGAACAG
ATTTGTGGTGGAGAGTGATATCCCAAACCTGCCATACCTTCAAGCAACTG
TTAAAGAAGTTTTCAGACTGCATCCTGGAGTTCCGCTCATCATCCCTCGT
CGTACCAATGAGGCATGTGAAGTAGCTGGCTATCATATTCCGAAGCATTG
CATCGTCTATGTGAATATCTGGGGAATAGCAAGGGATCCCAAAGTGTGGG
AAGATCCTTTAGAATTCAAGCCTGAGAGGTTCATTGGGTCGAGTGTAGAT
GTGAAAGGTCAAGACTTTAATCTCCTGCCTTTCGGGACAGGGAGAAGGTC
TTGTGTCGGATGGCCTCTTGCTCATCGGATGGTGCATTATTACTTGGCTG
CGTTACTCCATGCTTTTGAATGGGACTCTCCTCCTGAGATTTTAAGGGAT
ATGAACGAGAGGGTTGGCCTTACTCTTCAGAAAGACAAGAGCTTGCTTGG
CACTCCCAAACCTCGACTGCAAGCTTCTGTTTATGAGCATTAG
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protein sequence of Tc09v2_p018700.1

>Tc09v2_p018700.1 ID=Tc09v2_p018700.1|Name=Tc09v2_p018700.1|organism=Theobroma cacao|type=polypeptide|length=531bp
MDLLHSSILSVIAHFSSLVSGSMTILAVTMSIASYFLIPILLGGRSKNWK
NAPPGPVGWPILGSLPHLSHRLHEDFFHLAKIHGPLFCLKMGIKPAIVIS
SPEMASEILKEKEGMFSSRTITEAIRVVSYDAHSIIFSPYGPRWKALRRI
LITELLSPKAFEQFEPVRTTQVHGLLKYLYILSKSSTQVNIAESAFTALA
NLVSNILCSKSLFDNSKPEGRKMKEMFWEMIKVLGTPNFSDLIPIVKPFD
LQGLKRKISGIFDQLDAFYEKLIEERLAEKGTAELQRGNNETMDMLDVLL
SYKSNDKENGLDRFSRAIIKGMLSEMFIAGTETTSSTVEWGMTEILRKPS
VHKKLLLELDQVVGKNRFVVESDIPNLPYLQATVKEVFRLHPGVPLIIPR
RTNEACEVAGYHIPKHCIVYVNIWGIARDPKVWEDPLEFKPERFIGSSVD
VKGQDFNLLPFGTGRRSCVGWPLAHRMVHYYLAALLHAFEWDSPPEILRD
MNERVGLTLQKDKSLLGTPKPRLQASVYEH*
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