Tc09v2_t017050.1

Overview
NameTc09v2_t017050.1
Unique NameTc09v2_t017050.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length480
Properties
Property NameValue
NoteCCHC-type integrase
Model evidenceSupporting evidence includes similarity to: 1 Protein
Productuncharacterized LOC108663262
Cross References
External references for this mRNA
DatabaseAccession
GeneID108663262
GenbankXM_018126858.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc09v2_g017050Tc09v2_g017050Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc09v2_p017050.1Tc09v2_p017050.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto457511auto457511Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto457512auto457512Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc09v2_t017050.1 ID=Tc09v2_t017050.1|Name=Tc09v2_t017050.1|organism=Theobroma cacao|type=mRNA|length=480bp
ATGGATAGGAGATCTTTGATTCAGGAGATGCATGGCTTAGGAGATATGGG
TGTGCATTTTGAATTTTCAAGGACAAATGCATTGTTCACACATTTTAGGG
TTAGACCTATTTTAATAGACCGAATTAAAGCTACACAAAGGAAATATGAG
TTTGTGGCCAAGGCCTTAGAGGACCCTCAGGGAAGGAAGGGAAAAATGTT
TACTAAAGGTATAAATGGTGTATTGAGGTATGGAACCAGACTTTATGTGC
CCAACAGTGATGGATTGAGGAGAAAAATACTAAAAGAGGCGCATATGGCA
GCGTGCGTGGTACATCCAAGAGCTACAAAGATGTATCAAGATTTAAGGGA
GTTATACTGGTGGGAAAGACTTAAGAAATATGTAGCTGAGTTTGTTGCTA
AGTGCCTAGTTCGTCAACAAGTTAAAGTAGAGCACCAAAGGCCCGTAAGA
CTACTACAACCATTACCGGTGCACGAATGA
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protein sequence of Tc09v2_p017050.1

>Tc09v2_p017050.1 ID=Tc09v2_p017050.1|Name=Tc09v2_p017050.1|organism=Theobroma cacao|type=polypeptide|length=160bp
MDRRSLIQEMHGLGDMGVHFEFSRTNALFTHFRVRPILIDRIKATQRKYE
FVAKALEDPQGRKGKMFTKGINGVLRYGTRLYVPNSDGLRRKILKEAHMA
ACVVHPRATKMYQDLRELYWWERLKKYVAEFVAKCLVRQQVKVEHQRPVR
LLQPLPVHE*
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