Tc09v2_t013930.2

Overview
NameTc09v2_t013930.2
Unique NameTc09v2_t013930.2
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length1455
Properties
Property NameValue
NoteDiacylglycerol kinase 7
Model evidenceSupporting evidence includes similarity to: 4 ESTs, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
Productdiacylglycerol kinase 4, transcript variant X2
Cross References
External references for this mRNA
DatabaseAccession
GeneID18589123
GenbankXM_007013956.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc09v2_g013930Tc09v2_g013930Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc09v2_p013930.2Tc09v2_p013930.2Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto451207auto451207Theobroma cacaoexon
exon-auto451208auto451208Theobroma cacaoexon
exon-auto451209auto451209Theobroma cacaoexon
exon-auto451210auto451210Theobroma cacaoexon
exon-auto451211auto451211Theobroma cacaoexon
exon-auto451212auto451212Theobroma cacaoexon
exon-auto451213auto451213Theobroma cacaoexon
exon-auto451214auto451214Theobroma cacaoexon
exon-auto451215auto451215Theobroma cacaoexon
exon-auto451216auto451216Theobroma cacaoexon
exon-auto451217auto451217Theobroma cacaoexon
exon-auto451218auto451218Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto451219auto451219Theobroma cacaoCDS
CDS-auto451220auto451220Theobroma cacaoCDS
CDS-auto451221auto451221Theobroma cacaoCDS
CDS-auto451222auto451222Theobroma cacaoCDS
CDS-auto451223auto451223Theobroma cacaoCDS
CDS-auto451224auto451224Theobroma cacaoCDS
CDS-auto451225auto451225Theobroma cacaoCDS
CDS-auto451226auto451226Theobroma cacaoCDS
CDS-auto451227auto451227Theobroma cacaoCDS
CDS-auto451228auto451228Theobroma cacaoCDS
CDS-auto451229auto451229Theobroma cacaoCDS
CDS-auto451230auto451230Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc09v2_t013930.2 ID=Tc09v2_t013930.2|Name=Tc09v2_t013930.2|organism=Theobroma cacao|type=mRNA|length=1455bp
ATGGACTCGCCGACCTCGGCAGGGGATTCATCGACGGCACGGATCGTGGC
TCGTTCCTCGATGATGGACTCGATAAGAGCTTGCGGCTTGTCGGGTTTAG
CCGGTGTTAGGATCGATAAGGAAGACCTCAGACGGCGGCTTTTGATGCCA
GAGTATCTACGCCTTGCGATGCTAGATTCCATTAAGAAAAAAGACGTAGA
TGGCGGGGACCAGCATTTCCGTCTACATGGCTCCGACGATGTTCCCTGTC
CTGAATCCCCTATGGTCGTTTTCATTAACCCCCGTAGCGGCGGCCGTTAT
GGGCCCATCCTTAAAGAGCGTATCCAGCAACTAATCAGCGAAGAACAGGT
GTTTGACCTCCACGATGTGAAACCGCATGAATTTGTACGGTATGGACTTG
CTTGCCTTGAGAAGTGGGCTAACAACGGTGACCGTTGTGCCAAAGAGACA
CGTCAGAACATGAGAGTTGTGGTTGCTGGAGGTGACGGTACAGTGGGTTG
GGTACTTGGTTGTCTTGGAGAACTTCATCAAAAAGGCCGGGAGCCAGTTC
CTCCTGTAGCTGTCATTCCTCTTGGTACAGGCAATGACTTGTCTAGAAGT
TTCGGTTGGGGAGGTTCATTTCCTTTTGCCTGGAAATCGGCTATTAAAAG
AACTTTGCACAGAGCTACTATGGGTCCAATTTGCCATCTAGATAGTTGGC
ATGTTGTGTTGCAAATGCCCGGCGGAGAAGTAGTTGATCCTCCCTATTCT
TTGAAGGCTACAGAAGAGTGTTCTCTTGATCAGACTTTGGAGATTGATGG
GGATGTTCCTGACAAAGTGAACTGCTATGAAGGAGTATTCTATAATTACT
TTAGCATTGGAATGGATGCACAAGTTGCTTATGGATTCCATCATTTACGT
AATGAAAAACCTTACTTTGCACAAGGTCCTATTACAAATAAGATTATCTA
CTCCGGTTACAGTTGCACTCAGGGTTGGTTTCTCACACCTTGCATGAGTG
ATCCAAGTTTAAGGGGACTCAAGAACATTTTAAGGATGCATGTTAGAAGG
GTCAATTGTTCAGAATGGGAGCAGATTCCAATCCCTAAAAGCGTGAGGGC
CGTTGTTGCTTTAAATCTTCATAATTATGGAAGTGGGAGAAATCCATGGG
GTAATCTAAAGCCAGAATATTTGGAAAAGAGAGGCTTTGTTGAGGCCCAT
GCTGATGATGGTCTTCTAGAAATTTTTGGCTTAAAGCAAGGATGGCATGC
ATCATTTGTAATGGTTGAACTCATCTCGGCAAAACACATTGCGCAGGCTG
CATCAATTAGGCTGGAGATAAGGGGTGGGGAGTGGAAAGATGCATTTATG
CAGATGGATGGGGAGCCATGGAAACAGCCAATGAACAAGGAGCATTCAAC
ATTTGTGGAAATTAAGAGGGTGCCGTTCCAGTCACTAATGATTAACGGAG
AGTGA
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protein sequence of Tc09v2_p013930.2

>Tc09v2_p013930.2 ID=Tc09v2_p013930.2|Name=Tc09v2_p013930.2|organism=Theobroma cacao|type=polypeptide|length=485bp
MDSPTSAGDSSTARIVARSSMMDSIRACGLSGLAGVRIDKEDLRRRLLMP
EYLRLAMLDSIKKKDVDGGDQHFRLHGSDDVPCPESPMVVFINPRSGGRY
GPILKERIQQLISEEQVFDLHDVKPHEFVRYGLACLEKWANNGDRCAKET
RQNMRVVVAGGDGTVGWVLGCLGELHQKGREPVPPVAVIPLGTGNDLSRS
FGWGGSFPFAWKSAIKRTLHRATMGPICHLDSWHVVLQMPGGEVVDPPYS
LKATEECSLDQTLEIDGDVPDKVNCYEGVFYNYFSIGMDAQVAYGFHHLR
NEKPYFAQGPITNKIIYSGYSCTQGWFLTPCMSDPSLRGLKNILRMHVRR
VNCSEWEQIPIPKSVRAVVALNLHNYGSGRNPWGNLKPEYLEKRGFVEAH
ADDGLLEIFGLKQGWHASFVMVELISAKHIAQAASIRLEIRGGEWKDAFM
QMDGEPWKQPMNKEHSTFVEIKRVPFQSLMINGE*
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